Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2280g00002 ATGTTTCCTTCAACACTAGCGATTCCTGCGATCCTTTTGTTGACATTGATATTGGTCCTATCCACTAATATCCTCTTCCCAAAACGACACAAAGATGGTCAGAACCAACCACAGGGGCCACCGCCCCTCCCAATCATTGGTAACCTCCACATGTTGGGTAAACGACCACACCGTAGCCTTCGATCGCTGGCCCAAAAATATGGTCCCATCATGTCGTTGAAGTTGGGACAAGTTCCTGCGATTGTCGTTTCGTCCCCTGAAGCTGCCGTTCAATTCCTCAAGACTCATGACACTGTTTTTGCGACCCGACCCAAAATACGGGCGGCGGATCCGTTTTCTAAAGGAGCCAACAAGGGAGTGGTGTTTGCCGAGTATGGTCCGTACTGGAGACATGTGAGGAAACTGTGCACCATTCACCTTCTAAGCGCATCAAGAGTGGAGATGTTTGCACCTTTGAGAAAGGAGGAGGTGGGAGTGACGGTGAAGTCCCTAGAGAGAGCCGCGGCGGCGCGTGAGGTTGTTGATATTAGTGAGATGGTGGGGGAGCTTATAGAGAACATAATTTATCGGATGGTCCTGGGACGCGCCAAGGACGATAGGTTTAACCTAAAAGGGCTGATTAAGGAGGCAATGAGCTTGGTGGGAGCATTTAATCTCGCTGATTATGTCCCTTGGCTCGGTGTATTTGATCTCCAGGGCTTGACACGAAAGTTAAAGAGAAACAACAAGGCGCTCGAGGATGTGTTGGATAAGATAGTGATGGAGCATGAAAACACTTCAAAAGGACAAAATTTACAACACCATAACGACTTCATACACATATTGCTTTCCTTGATGCACCAACCTGTGGATCTACAGGACGACCAAGACCATGTGATAGATAAAGCCAACATCAAAGCTATTTTATCAGATATGGTTGGAGGGGCAACTGACACTTCTATTGTTGTAATTGAGTGGGCTTTATCCGAACTTTTGAGGCATCCAAGAGTGATGAAAAATCTTCAAAATGAGCTACAAAACGTTGTTGGAATGACGAGAATGGTGGAAGAGTCTGATTTAGCGAAGTTAAGTTATTTAGATATGGTAATCAAAGAGACTCTTAGACTATATCCAGTTGCACCTTTACTTGTCCCTCGAGAGAGTATGGAGGATGTTACAATCAATGGGTGCTATATAAGGAAAAAGACAAGGGTAATTGTAAATGTGTGGGCCATAGGACGTGATCCTAAGGTTTGGTCTGAAAATGCGCATATGTTCCATCCTGAGAGATTTGTTGACAGCAATATTGACGTTCGAGGACACGATTTTCAACTGTTACCATTTGGCTCAGGTCGCAGAGGTTGTCCTGGCATGAACTTGGGTATGACTAGTGTTAAATTTGTTTTAGCTCAATTGGTTCATTGCTTTTCTTGGGAACTTCCTTATGGTATGTCTCCCAGTGACTTGGACATGAATGAAGAGTTTGGTCTCTCAATTCCAAGAGCCAAGCATTTGCTAGCAGTTCCAACTTATCGTTTACATACGTAA 1527 0.4473 MFPSTLAIPAILLLTLILVLSTNILFPKRHKDGQNQPQGPPPLPIIGNLHMLGKRPHRSLRSLAQKYGPIMSLKLGQVPAIVVSSPEAAVQFLKTHDTVFATRPKIRAADPFSKGANKGVVFAEYGPYWRHVRKLCTIHLLSASRVEMFAPLRKEEVGVTVKSLERAAAAREVVDISEMVGELIENIIYRMVLGRAKDDRFNLKGLIKEAMSLVGAFNLADYVPWLGVFDLQGLTRKLKRNNKALEDVLDKIVMEHENTSKGQNLQHHNDFIHILLSLMHQPVDLQDDQDHVIDKANIKAILSDMVGGATDTSIVVIEWALSELLRHPRVMKNLQNELQNVVGMTRMVEESDLAKLSYLDMVIKETLRLYPVAPLLVPRESMEDVTINGCYIRKKTRVIVNVWAIGRDPKVWSENAHMFHPERFVDSNIDVRGHDFQLLPFGSGRRGCPGMNLGMTSVKFVLAQLVHCFSWELPYGMSPSDLDMNEEFGLSIPRAKHLLAVPTYRLHT 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2280g00002 508 Pfam Cytochrome P450 37 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 Gene3D Cytochrome P450 27 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Pral2280g00002 508 FunFam Cytochrome P450 83B1 24 501 - -
Pral2280g00002 508 CDD CYP71-like 66 498 - -
Pral2280g00002 508 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 SUPERFAMILY Cytochrome P450 34 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PANTHER CYTOCHROME P450 93A3-LIKE 12 507 - -
Pral2280g00002 508 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00002 508 Coils Coil 231 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2280g00002 Pral-Chr2280 58590 60509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2280g00002 12 506 Cytochrome P450 AT5G07990 41.339 1.42e-124 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2280g00002 - - pcin:129301104 739.569