Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2280g00001 ATGATCGGAAGACCACCGTCCCTACCAATCATCGGCAACCTTCACTTGTTGGGCGAACGGCCACACCGCAGCCTTCAATCACTGGCCAAAATATACGGTCCGATCATGTCGTTGAAGCTGGGACAAGTTCCTGCGGTCGTCGTTTCGTCCCCTGAAGCTGCGGGGCAAATCCTGAAGACGCACGACGCCGTTTTTGCATCTCGACCCAAAGTACAGTCGACAGATCCGTTCAAGAAGGGAGTGAGGGGAGTGGCGTTTGCAGAGTATGGTCCATACTGGAGATATGTGAGGAAATTGTGTACCCTTCATCTTCTAAGCGCGTCAAGAGTGGAGATGTTCGCTCCTCTGAGGAAGGAGGAGGTGGGAGCGACGGTGAAGAGGCTGGAGAGGGCGGCGGCCGCCGGAGAAGTTGTGGATGTTAGTGAAAAGGTGGGGGAGCTTTTGGAGAACATGATGTATAGGATGGTGCTGGGACGTCGTAAGGATGATAGGTTTCAGTTGCGAGGGCTGATGAACGAGGTTCTGAACTTGGTGGGACAGTTTAACATTGCTGATTATATCCCTTGGCTTGCTGCGTTTGATCTTCAGGGATTGACACGAAAGTTAAAGAGAAACAGAAAGGCGCTTGACGATGCATTGGAGAAGATAATCGCTGAGCATGAACTTGCACTTACAGAACCAAATTTACAGCACCATAAAGATTTCATCTCCATATTGCTTTCTTTGCTGCATCAACCCATGGATTTGCTGCACAATGATCAAGACCACACCATTGATAGGCCTAACCTCACGGCTCTTTTATTAGATATGATCCTTGCGGCAACTGATACTTCTTCTGTTGTAATTGAATGGGCTCTGTCTGAACTCTTGAGGGATCCAAGAGTCATGAAAGATCTCCAAAATGAACTGCAAGAAGTAGTTGGAATGAAAAGAATGGTGGAAGAAGTTGATTTAGTGAGCTTAAGTTATTTGGACATGGTCATTAAGGAGACTCTCAGACTACATCCACCTGGACCTTTCTTAATCCCTCGAGAAAGTATGAAGGATGATGTCATAGTCAGTGGATATTGCATAAGAAAAAAGACAAGGATCTTAGTAAATGTATGGGCCATAGGACGTGATCCTAAGGTTTGGTCTGACAATGCTCATTTGTTCTATCCAGAAAGATTTGTCGATAGCAATATAGATGTTCGAGGGCATGATTTCCAGCTATTACCATTTGGCTCAGGTCGAAGAGGATGCGCTGGGACCCAGTTGGGTCTAACTACAGTTAAATTAGCTTTAGCTCAACTGGTGCATTGCTTTAATTGGGAGCTTCCTCGTGGCGTTTGTCCCGGTGACTTGGACATGAACGAAAAGTTTGGTCTCACAATCCCAAGAACTAAGCCCTTACTGGCTATTCCAACTTATCGTTTACATAGACCACCGGGCCCAATGTCCCTTCCGATCATCGGCAACCTCCACATGCTGGGAGAACTGCCCTATCGCAGCCTTCAATCTCTCGCCCAAAAGTACGGCCCCATCATGTCGTTCAAGTTGGGACAAGTTCCTGCCGTTGTTGTTTCGTCCCCTGAAGCCGCGAAGCTATTCCTCAAAACTCACGACACCGTTTTCGCATCCCGACCCCATATACAAGCCTCGGATCCACTTTCTAGAGGAACCAAGGGACTCGTGTTTGCAGAGTATGGTCCGTATTGGAGATATGCGAGGAAAGTGTGCACGCTCCATCTTCTAAGCGCGTCAAGAGTGGAGATATTCGCTCCTCTGAGGAGGGAGGAACTGGGAGCCATGGTGAAGTTACTGGATAGAGCTGCGGCGGCGCGTGAGGTGGTCGATCTCAGTGAGGTGGTGGGGGACGTTATAGAAAACATAATATATAGGATTATACTGGGACGTGCTAAGGACGACAGGCTTAACTTAAAGGGGTTGATTACGGAGGGACTAATCTTGGCGGGGCAATTTAATCTGGTTGATTTTGTCCCTTGGCTTGGTGTATTTGATCTCCAGGGTCTGACAGGAAGACTAAGGAGAAACCATAAGGCGCTTGATGGTGTTCTGGAAAAGATAGTGAGAGAGCACGAAGAAGCTTCTAAAGACCACAAGGACTTCATGAACACAATGCTTTCCCTGGTGCATGATCAGCCCATAGATTTGCAGGACGAACAAAACCATGTGATTGATAGACCTCACCTCAGGGCCATTCTAATAGACATGATTTTTGCCGCAACTGACACTTCCAGTGTTGCAGTTGACTGGGTTTTATCTGAGCTCTTTAGGAATCCAAGAGTGATGAAAACTCTCCAAAACGAGCTTAAAAATGCAGTTGGAAGGAACAGAATCGTCGAGGAAGGTAATTTACAGAATCGTCGAGGAGGTGATTTAGCCAAGTTAAGTTACTTAGACATATTCATTAAGGAGACTCTCAGACTGCATCCCCCTGCTCCTTTAACCCCTCGAGAAAGTACTAAGGATGTCACAGTTAATGGATATTACATAAGAAAAAAGACAAGGATCATAGTGAATGTGTGGGCTATAGGACGAGATCCTAAAATATGGTCAGATGATGCTTCTTTGTTCTATCCAGAGAGGTTCCTCGACAGAAACATAGACATACGAGGACACGATTATGAATTGTTACCATTTGGATCAGGTCGTAGAACATGTCCTGGAATTCAGATGGGTCTGACTACAGTTAAAATTGCTGTGGCTCAATTGGCGCATTGCTTTAATTGGGAGCTTCCTTTAAACAGGCGTCCTAGTGACTTGGACATGAACGAAGAGTTTGGCCTTACAGTCCCAAGAACCAAGCACTTGTTAGCCGTTCCAACTTATAGATTGAGCACAGAATGTCCATATTAG 2859 0.4631 MIGRPPSLPIIGNLHLLGERPHRSLQSLAKIYGPIMSLKLGQVPAVVVSSPEAAGQILKTHDAVFASRPKVQSTDPFKKGVRGVAFAEYGPYWRYVRKLCTLHLLSASRVEMFAPLRKEEVGATVKRLERAAAAGEVVDVSEKVGELLENMMYRMVLGRRKDDRFQLRGLMNEVLNLVGQFNIADYIPWLAAFDLQGLTRKLKRNRKALDDALEKIIAEHELALTEPNLQHHKDFISILLSLLHQPMDLLHNDQDHTIDRPNLTALLLDMILAATDTSSVVIEWALSELLRDPRVMKDLQNELQEVVGMKRMVEEVDLVSLSYLDMVIKETLRLHPPGPFLIPRESMKDDVIVSGYCIRKKTRILVNVWAIGRDPKVWSDNAHLFYPERFVDSNIDVRGHDFQLLPFGSGRRGCAGTQLGLTTVKLALAQLVHCFNWELPRGVCPGDLDMNEKFGLTIPRTKPLLAIPTYRLHRPPGPMSLPIIGNLHMLGELPYRSLQSLAQKYGPIMSFKLGQVPAVVVSSPEAAKLFLKTHDTVFASRPHIQASDPLSRGTKGLVFAEYGPYWRYARKVCTLHLLSASRVEIFAPLRREELGAMVKLLDRAAAAREVVDLSEVVGDVIENIIYRIILGRAKDDRLNLKGLITEGLILAGQFNLVDFVPWLGVFDLQGLTGRLRRNHKALDGVLEKIVREHEEASKDHKDFMNTMLSLVHDQPIDLQDEQNHVIDRPHLRAILIDMIFAATDTSSVAVDWVLSELFRNPRVMKTLQNELKNAVGRNRIVEEGNLQNRRGGDLAKLSYLDIFIKETLRLHPPAPLTPRESTKDVTVNGYYIRKKTRIIVNVWAIGRDPKIWSDDASLFYPERFLDRNIDIRGHDYELLPFGSGRRTCPGIQMGLTTVKIAVAQLAHCFNWELPLNRRPSDLDMNEEFGLTVPRTKHLLAVPTYRLSTECPY 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2280g00001 952 PRINTS E-class P450 group I signature 53 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 282 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 325 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 262 279 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 29 48 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 Pfam Cytochrome P450 5 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 Pfam Cytochrome P450 475 937 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 CDD CYP71-like 32 464 - -
Pral2280g00001 952 PANTHER CYTOCHROME P450 93A3-LIKE 5 473 - -
Pral2280g00001 952 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS P450 superfamily signature 326 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 PRINTS P450 superfamily signature 273 290 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 Gene3D Cytochrome P450 468 944 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 Gene3D Cytochrome P450 1 465 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Pral2280g00001 952 FunFam Cytochrome P450 83B1 2 467 - -
Pral2280g00001 952 Coils Coil 195 219 - -
Pral2280g00001 952 FunFam Cytochrome P450 83B1 468 941 - -
Pral2280g00001 952 SUPERFAMILY Cytochrome P450 4 471 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2280g00001 952 CDD CYP71-like 504 938 - -
Pral2280g00001 952 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 881 890 IPR017972 GO:0005506|GO:0016705
Pral2280g00001 952 SUPERFAMILY Cytochrome P450 470 945 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2280g00001 Pral-Chr2280 31084 49206 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2280g00001 475 941 Cytochrome P450 AT3G48310 37.527 9.73e-112 351