Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2279g00003 ATGTGTCTGGGCTTATTGGGATCAGAATTAGCAAATGCACAGTATTATCAGAAAATTGGAGGGAAACTTGTCCCTTACTGGAAGATCACTGTCGACCCCGCCGGTGCCGGCAACTTCACCACCATCCAAGAAGCCATAAACTCAGTCCCTTCCAACAACAACAACTGGGTTTCCATCAATATAAAGGCAGGCATCTATAGGGAAAAAGTGAGGATTCCTGATGACAAGCCGTATATAGTATTGAAAGGCGCAGGGAAGAGGAGAACTATTGTTGTTTGGGATGATCATGAAACAGTGGCACAGAGTCCTACCTTCACCTTGCTGGCTGATAATGTTGTCGTCAAATGTTTGAGCTTTCGGAATTCATACAATAATCCAATTAACGGCAAACCTAGGAAACCGGCGGTGGCGGCAATGGTAGCCGGCGACAAGGCTTTCTTCCTCCGAGTAGGTTTCTATGGTTTACAAGACACATTGTGGGATGATCAAGGACGACATTACTACAAACTTTGCACCATTCAAGGTGCTGTTGATTTTATTTTTGGTGCAGGCCAATCTATATTTGAGAGATGTTCAATATCAGTGATAGCTGGAGCCTTAGATGGGCTTCCAGGGTTTATAACAGCGCAAGGAAGAACAAATCCAAATGATGCAAATGGGTTTGTGTTTAAACATTGTCATGTGTTTGGGAATGGCACAACATATTTGGGAAGGCCTTGGAGAAGTTACTCAAGAGTCCTCTTCTACAAAACCAATATGTCTCAAGTTGTGGAACCTAAGGGTTGGCAGCCGTGGAATTTTGCTACTAATGTGAATCGGGTAACATTTGCAGAGTATGATTGCTTTGGGCCTGGGTCTAACACATCCCAAAGAGTGAGCTGGTCCAAGAACAAGCTTGATTCACTATATGTGGATCAAATGGCTAATATGAGTTTTATTGATTCTGAAGGATGGCTTCAGAATCAACTTTTCTAA 975 0.4308 MCLGLLGSELANAQYYQKIGGKLVPYWKITVDPAGAGNFTTIQEAINSVPSNNNNWVSINIKAGIYREKVRIPDDKPYIVLKGAGKRRTIVVWDDHETVAQSPTFTLLADNVVVKCLSFRNSYNNPINGKPRKPAVAAMVAGDKAFFLRVGFYGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSIFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKHCHVFGNGTTYLGRPWRSYSRVLFYKTNMSQVVEPKGWQPWNFATNVNRVTFAEYDCFGPGSNTSQRVSWSKNKLDSLYVDQMANMSFIDSEGWLQNQLF 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2279g00003 324 ProSitePatterns Pectinesterase signature 2. 173 182 IPR033131 -
Pral2279g00003 324 FunFam Pectinesterase 25 323 - -
Pral2279g00003 324 Gene3D - 27 324 IPR012334 -
Pral2279g00003 324 SUPERFAMILY Pectin lyase-like 27 320 IPR011050 -
Pral2279g00003 324 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 29 320 - -
Pral2279g00003 324 Pfam Pectinesterase 29 314 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2279g00003 Pral-Chr2279 118628 123031 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2279g00003 29 266 Carbohydrate Esterase AT2G19150 47.917 3.63e-78 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2279g00003 - - qsa:O6P43_026793 461.84