Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2278g00010 ATGGGTGAGGAATTTCAAGCTGGGATTTGTGGTGGGAATAATTACTGGTGGATCAATAACAACATGATGATGAACTCAACAACGCGAAGTGTTTTCCCTTCGATGCTGAGTTCATCTCCGTGTTCTGTGCTCACAGCTAACCACGATCTTTCTGGAGGAGGCGGAGGTATGATTGGCTACAGCACATGGCAGACGGATACGGTGGACTTGAAGGCCCCAGACACCGCGGAGGCGACGGCGCCGGCCACCTCTCTGGGGTTTCTCGATGCAACCACGACGACGAAGCCACTGCTTCAGAATCATCATCATCATCATCATCATCAGACTGCAGAACCTGATATTGCAGACAATCATCATAATAATGGTTCTATCTTGATGGATTCCTCTTCTTTGGAAATGATCATGGGTTGGAATCATTCTCTCTTCGGCAATTCTGTATCACAAAGCCAAGATCAGAAGAGAGAGATGTCGATGAAGAATCAAGATTTATGTGGTGGTGGTAATTTCTCAGTTGGGTCAGTTCCAGTTTCTTCAAGTTCGACGTTGATTCAAAGTTTGTATGATATTCCTCAAGCAGCACAGTCACTTTTCACCAACCCTCCTATACCACAATCATCTTCCATGGCCTATTCTTCAAGTACATCAAATAATTATGGCGCAATATCTAATTCCACTGATCAATTCATGCCTTCACCAACTACTACTACTACTACTTCGTCTTCTTCTTCTTCTTCTTCTTGGTCCAGACCCTCTAATAATAACAATCCCTTCTTGAAGTCTAGTGGTGGTGGCTTGCACTTTTCTAACTGTACTCCTTTCTGGAATGCTTCTGCTGAAACAACACCCCATGTTTTTGCTCCTTTAATTACTGAGAAACCCAATTTCACAAGCTCTCTCGTACCCAAGCCCAAGAGAGAAGAAGTTTCGGAGTCGGCAAAGAAAGGTTCGTGTGAACCTGCAATCAAGAAGCAAAGGATTGAAACCCCATCGCCATTACCAACTTTCAAGGTTCGGAAAGAGAAGCTAGGGGACCGAATCACTGCTCTTCAGCAATTGGTGTCGCCTTTCGGAAAGACTGACACTGCATCTGTTCTTCACGAAGCCATCGACTACATCAAGTTCCTGCATGAACAAGTCAGTGTTTTGAGCACTCCTTACATGAAAAATGGAGTTCCCATCCAACACTGCCAGCAGGGTTGTGAAGTGAAGGAGTCATCGGAAGGGCCAAAACAAGACTTGAAAAGCCGAGGGCTGTGTTTGGTTCCTATTTCAAGCACATTCCCAGTGACAAACGAAACACCTGTGGATTTCTGGACGCCGTCATTTGGAGGGACACTCATCAGATAA 1347 0.4514 MGEEFQAGICGGNNYWWINNNMMMNSTTRSVFPSMLSSSPCSVLTANHDLSGGGGGMIGYSTWQTDTVDLKAPDTAEATAPATSLGFLDATTTTKPLLQNHHHHHHHQTAEPDIADNHHNNGSILMDSSSLEMIMGWNHSLFGNSVSQSQDQKREMSMKNQDLCGGGNFSVGSVPVSSSSTLIQSLYDIPQAAQSLFTNPPIPQSSSMAYSSSTSNNYGAISNSTDQFMPSPTTTTTTSSSSSSSSWSRPSNNNNPFLKSSGGGLHFSNCTPFWNASAETTPHVFAPLITEKPNFTSSLVPKPKREEVSESAKKGSCEPAIKKQRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIDYIKFLHEQVSVLSTPYMKNGVPIQHCQQGCEVKESSEGPKQDLKSRGLCLVPISSTFPVTNETPVDFWTPSFGGTLIR 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2278g00010 448 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 154 428 - -
Pral2278g00010 448 CDD bHLH_AtbHLH_like 332 383 IPR045239 -
Pral2278g00010 448 MobiDBLite consensus disorder prediction 221 259 - -
Pral2278g00010 448 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 326 375 IPR011598 GO:0046983
Pral2278g00010 448 MobiDBLite consensus disorder prediction 99 122 - -
Pral2278g00010 448 FunFam Transcription factor bHLH123 family 336 398 - -
Pral2278g00010 448 Gene3D - 336 389 IPR036638 GO:0046983
Pral2278g00010 448 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 336 395 IPR036638 GO:0046983
Pral2278g00010 448 MobiDBLite consensus disorder prediction 303 321 - -
Pral2278g00010 448 MobiDBLite consensus disorder prediction 295 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2278g00010 Pral-Chr2278 150702 155250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2278g00010 230 448 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 50.870 2.24e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2278g00010 - - pcin:129287171 553.518