Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2277g00004 ATGGCGTCCGCTAACCCGTGTTATGGGTTGATGAAGTCGTGGGAGGCTATAATGGCGAAGATGAGGCTTTTGAAGTGGGTACTCTCTGTTTCAGTTGTATTTTTGTTCTTAATTGATGGGTCATCTTCTTCATTCACTCCTCCCGATGATTATTCTATTTCCTGCGGTGCTTCCCAAAACATCACCTTTCAAAGTCGTTCTTTTGTTCCTGATTCACAGCACTCTTCATTAACTCTGAAAACTGGGAATTCTTTGGTGGCCAGTTCCAAATCTGGTGTTCCTTCTCCTATCTACCAGTCAGCTCGGATTTTTACCTCTAAAGCTTCTTACAAATTCAAAATTAAGCAACAGGGTCGGCATTGGGTGCGGCTCTATTTCTGCCCTCTTCCCAACTCTGGCCATGACTTGACTTCTGCTTCTCTGTCAGTGGTCGCAGATGATTTTGTTCTTTTGAACAACTTCACCTTTAGGAAGTACAGTGATTCTCATATGTTCAAGGAGTATGCAATCAGTGTTACTTCTGATACCTTGACTCTCACCTTCATCCCTTCAAATGGTTCAGAAGCTTTTGTCAATGCAATTGAAGTTGTGTCCATTCCGACTGATCTGTTTGCTGATCAGGCATTCGGTCTACACCCTCCGTCCCCAGTCAGTGGCCTTTCTGAACTGGCTTTTGAAACTGTTTATCGATTAAACATTGGGGGCCCTTTGGTCACCGCTCAAAATGACACACTGGGTAGAACTTGGGTTAATGACCTGAACTACCTCCATGTGAATAGCTCTGTCCTCAATGTTTCAGTGAACCCTTCGAGCATCAAGTATCCACAAGCACAAGGTGTTACTCCTGAGACAGCACCAAATTGGGTTTATGCCACTGCTGATGTAATGGGTGATGCAAATGTTCCAAATACAAATTTCAACATCACTTGGGTTTTCTCTGTGGATCCAAGCTTCTCCTATTTTGTACGAGTACATTTCTGTGATATTATGAGCAAGTCTCTCAACAGTTTGGTGTTCAATCTATACATAAATTCTGACCTAGCTTCTGGAAGTGTCGACCTTTCAACCTTAACTGGTAACTTGAATGTGCCTTACTATAGGGACTTCGTTTCTGGTGCCTCAGCAGATTCAAACACTTTAACTGTGAGTGTTGGTCCAGATAATATGGCAGACACTAGAAATGCCACCATGAATGGTTTGGAGATAATGAAAATTAGCAACAAGTTGAAGAGCTTCGACAAGAATGCTTCAGTTGAGAGTCTCCTTCCGAGTTCGCCTTCAAAGATCGGCAAGATAGGAATTATAGTAGGTTCTGTCATTGGGGCTGTAGCAGCATTAGCATTGCTTGGATTGTGTTATTGCTGCTTCGTAGGGCGCAAGGCTAAGCCTGCTCAACAAGGGCATTCATGGCTGCCTTTACCTCTGTATGGAAACTCTCAGACCATGACAAAAGTGTCAACAACTTCTCAGAAGAGCGGAACTGCAAGCTGCATTTCTTTAGCTTCCTCAAATCTTGGACGATTCTTCAGCTTCCAAGAAATCCTGGATGCAACCAATAAATTTGATGAAAAGTTGCTTCTTGGTGTTGGGGGTTTTGGGAGGGTTTATAAGGGAACACTGGAAGATGGGACAAATGTAGCTGTGAAAAGGGGCAATCCCAGATCTGAACAAGGTCTTGCAGAATTCAGAACGGAAATTGAAATGTTATCCAAGCTTCGCCATCGGCATCTTGTGTCTCTCATCGGCTACTGTGATGAGAGGTCAGAAATGATCCTTGTCTATGAATATATGGCTAATGGGCCCCTAAGGAGCCATTTATATGGAACAGACCTGCCACCTCTATCATGGAAGCAGAGGCTTGAAATTTGCATTGGTGCAGCAAGAGGCCTTCATTATCTCCACACAGGAGCAGCTCAAAGCATAATCCACCGAGATGTGAAGACAACAAACATACTCTTAGATGAGAACTTTGTTGCTAAAGTTGCTGACTTTGGCCTTTCAAAAACGGGTCCTGCACTTGATCAGACCCATGTAAGCACTGCAGTTAAAGGAAGTTTTGGCTATCTTGACCCTGAATACTTTAGGAGGCAACAACTTACGGATAAATCAGATGTGTATTCATTTGGGGTGGTTCTAATGGAGGTGTTATGCACAAGACCTGCTCTAAACCCTGTGCTTCCAAGGGAGCAGGTTAATATAGCCGAATGGGCAATGACTTGGCAGAAAAAGGGAATGCTTGACCAAATCATGGATCAGAATCTTGTGGGGAAGGTGAATCCTGCTTCTCTGAAGAAGTTTGGGGAGACAGCTGAGAAGTGCTTGGCTGAGCATGGCGTGGATAGGCCATCCATGGGAGATGTGTTGTGGAATCTCGAGTATGCTCTACAACTTCAAGAGACCTCATCAGCACTCATGGAACCTGAAGACAACAGCACAAATCACATAACTGGAATTCAGTTGACTTCACTCGAGCCTTTGGATAATAGTGTGAGTAGGATTGAAGGGGGCATCTCTGGAAAAGATGATGATATAGAAGATGGAGCCACAAGTACCGTGTTCTCACAAATTGTAAATCCTCGTGGAAGGTGA 2589 0.4388 MASANPCYGLMKSWEAIMAKMRLLKWVLSVSVVFLFLIDGSSSSFTPPDDYSISCGASQNITFQSRSFVPDSQHSSLTLKTGNSLVASSKSGVPSPIYQSARIFTSKASYKFKIKQQGRHWVRLYFCPLPNSGHDLTSASLSVVADDFVLLNNFTFRKYSDSHMFKEYAISVTSDTLTLTFIPSNGSEAFVNAIEVVSIPTDLFADQAFGLHPPSPVSGLSELAFETVYRLNIGGPLVTAQNDTLGRTWVNDLNYLHVNSSVLNVSVNPSSIKYPQAQGVTPETAPNWVYATADVMGDANVPNTNFNITWVFSVDPSFSYFVRVHFCDIMSKSLNSLVFNLYINSDLASGSVDLSTLTGNLNVPYYRDFVSGASADSNTLTVSVGPDNMADTRNATMNGLEIMKISNKLKSFDKNASVESLLPSSPSKIGKIGIIVGSVIGAVAALALLGLCYCCFVGRKAKPAQQGHSWLPLPLYGNSQTMTKVSTTSQKSGTASCISLASSNLGRFFSFQEILDATNKFDEKLLLGVGGFGRVYKGTLEDGTNVAVKRGNPRSEQGLAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGTDLPPLSWKQRLEICIGAARGLHYLHTGAAQSIIHRDVKTTNILLDENFVAKVADFGLSKTGPALDQTHVSTAVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLMEVLCTRPALNPVLPREQVNIAEWAMTWQKKGMLDQIMDQNLVGKVNPASLKKFGETAEKCLAEHGVDRPSMGDVLWNLEYALQLQETSSALMEPEDNSTNHITGIQLTSLEPLDNSVSRIEGGISGKDDDIEDGATSTVFSQIVNPRGR 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2277g00004 862 FunFam receptor-like protein kinase FERONIA 482 596 - -
Pral2277g00004 862 ProSiteProfiles Protein kinase domain profile. 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2277g00004 862 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Pral2277g00004 862 SMART serkin_6 521 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2277g00004 862 Gene3D - 223 407 - -
Pral2277g00004 862 Gene3D - 50 200 - -
Pral2277g00004 862 FunFam Receptor-like protein kinase FERONIA 224 407 - -
Pral2277g00004 862 CDD STKc_IRAK 527 792 - -
Pral2277g00004 862 Gene3D Transferase(Phosphotransferase) domain 1 597 816 - -
Pral2277g00004 862 FunFam Putative receptor-like protein kinase 50 200 - -
Pral2277g00004 862 Gene3D Phosphorylase Kinase; domain 1 479 596 - -
Pral2277g00004 862 Pfam Malectin-like domain 53 405 IPR024788 -
Pral2277g00004 862 FunFam Receptor-like protein kinase FERONIA 597 813 - -
Pral2277g00004 862 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Pral2277g00004 862 SUPERFAMILY Protein kinase-like (PK-like) 500 792 IPR011009 -
Pral2277g00004 862 Pfam Protein tyrosine and serine/threonine kinase 526 788 IPR001245 GO:0004672|GO:0006468
Pral2277g00004 862 PANTHER OS07G0166700 PROTEIN 507 798 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2277g00004 Pral-Chr2277 21066 24469 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2277g00004 45 862 Receptor kinase-like Gene Family AT3G46290 53.230 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral2277g00004 Malectin_like 8.7e-39 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2277g00004 - - pcin:129316157 1488.4