Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2275g00001 ATGTCTCATCAGGGCACTGAAGCCCAATCAAACTTCTTAAAATTCTTCTGTGGTAACGGGACTACTGATGATAGCAACAGTACCTTTCAGACCAATCTCAAAAACCTTTTGATGAATATCTCCAACACGCAAATTGACTATGGCTTCTACAACTTCTCCTTCGGCAATAACTCCGACAAGGTTAACGCCATCGCACTCTGCCGAGGAGATGTTAAGGAAGCAGCTTGTCGTAGTTGTCTCACAGATTCAAGGTTTCTTCTTCTCCAAGTGTGCCCTAACGTGAAGGAGGCGATCGGGTGGTACGATAACTGCTTCCTGCGATACTCCAACCGAACCATATTCGGTCTCATGGAAACATCGCCATATTTCTATTTGTGGAACACACAGGATGCGTTGGAGAAAGACCAGTTCCAGAGTGTGGTGACGAAGATGATGAATCTTCTAAGAGACAGGGCTTCTTCCGGCAGCTCTATTCGGAAGTTCGCGGCGGCGAATGCGACAGGTCCAAGCAATCAGACGATATATGGTCTGGTGCAGTGCACGCCAGACTTGTCACAGAACATTTGCAGAGCTTGCTTGAATGGAGCAATCTCAGAAATTCCAAAATGTTGCAATGGAAATAGAGGTGGCAGAGTGGTACGACCTAGTTGCAACATAAGATATGAGACTTACAGCTTCTTTGATCTTGCGGCTGCACAACCATTCATATCATTACAGTCACCGCCGTCTCCTCTTCTGCCACCTGCTCTACCAACGACACCCAAGAAAGGAAAGAGAAACACAACAGGAATTGTTGTTGCCATAGTTGTGCCAACTGTTGCGTTCATCGCACTAGTCATCTTCATCGTTATTATTAAGGCCAGAAGGCTAAAGAAGACTATCCGAACCGGAGAAGATAAAGATGAAATCATGACCGTTGATTCATTGCAAATGGACTTTGAAACCATCAGAGCGGCAACGAATGATTTTTCTGATGCAAATAAGCTTGGACAGGGTGGATTTGGACCTGTTTACTTGGGTAGGCTATATAATGGACAAGAGATAGCTGTAAAAAGGTTGAGTAGAGATTCTGGGCAAGGTGAGATGGAGTTTAAGAATGAAGCGTTGCTGGTGGCCAAGCTACAACATCGGAATTTAGTGAGGTCACTTGGTTTTTGTCTCGAAAAAGAAGAAAAGCTCCTTATTTACGAGTTTGTTCCCAACAAAAGCCTTGATTGCTTCATCTTTGGTAAGTCAATATTAATGTTTGATTCTGTGATGTCATCTACGTGTATATTTAAGCTTTTCTTCTGA 1293 0.4377 MSHQGTEAQSNFLKFFCGNGTTDDSNSTFQTNLKNLLMNISNTQIDYGFYNFSFGNNSDKVNAIALCRGDVKEAACRSCLTDSRFLLLQVCPNVKEAIGWYDNCFLRYSNRTIFGLMETSPYFYLWNTQDALEKDQFQSVVTKMMNLLRDRASSGSSIRKFAAANATGPSNQTIYGLVQCTPDLSQNICRACLNGAISEIPKCCNGNRGGRVVRPSCNIRYETYSFFDLAAAQPFISLQSPPSPLLPPALPTTPKKGKRNTTGIVVAIVVPTVAFIALVIFIVIIKARRLKKTIRTGEDKDEIMTVDSLQMDFETIRAATNDFSDANKLGQGGFGPVYLGRLYNGQEIAVKRLSRDSGQGEMEFKNEALLVAKLQHRNLVRSLGFCLEKEEKLLIYEFVPNKSLDCFIFGKSILMFDSVMSSTCIFKLFF 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2275g00001 430 Gene3D - 9 112 IPR038408 -
Pral2275g00001 430 Gene3D - 119 226 IPR038408 -
Pral2275g00001 430 FunFam Cysteine-rich receptor-like protein kinase 10 121 226 - -
Pral2275g00001 430 FunFam Cysteine-rich receptor-like protein kinase 10 286 398 - -
Pral2275g00001 430 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Pral2275g00001 430 ProSiteProfiles Gnk2-homologous domain profile. 11 113 IPR002902 -
Pral2275g00001 430 SUPERFAMILY Protein kinase-like (PK-like) 303 414 IPR011009 -
Pral2275g00001 430 ProSiteProfiles Protein kinase domain profile. 323 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2275g00001 430 ProSiteProfiles Gnk2-homologous domain profile. 119 226 IPR002902 -
Pral2275g00001 430 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 10 113 - -
Pral2275g00001 430 Pfam Protein tyrosine and serine/threonine kinase 327 408 IPR001245 GO:0004672|GO:0006468
Pral2275g00001 430 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 10 233 - -
Pral2275g00001 430 Pfam Salt stress response/antifungal 133 224 IPR002902 -
Pral2275g00001 430 Pfam Salt stress response/antifungal 17 110 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2275g00001 Pral-Chr2275 6591 8709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2275g00001 12 409 Receptor kinase-like Gene Family AT4G05200 44.717 1.84e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2275g00001 PK_Tyr_Ser-Thr 1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2275g00001 - - gmx:113000773 455.292