Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2273g00003 ATGGCAAACAGAGTCTACGGTGATGGAATATGGAGGAAAGAGGGGGGAAAAGAGAGGGGGGATAGGCATGATAGGAAGGAATTACATCGAAAAACACGGGCAAAGTTATTTAACTTAGATCCGTCGACTAGTTCATCACCATTTGGGATCGATCGGTTTCTCTTTCTGGGTGTCGATCTTATTTTCTGTGCTGATCCATCTTCTTCTCCTTCTTTCTTCTTTGTTTCTTTCAATTATAACCTCTCTCTTCAACTAGCAATTCTGGCTAATCCTTGGTGGACCGGTCAGGTGGGGTTGCCGGGGGTTGACCCGGCGGCCAATTCACCGTCGGTGAACAAACGGCACAACACCGACCTCTCTATCAACGAAAGCAGCGGCAAGAACAGTGGCGGCAATAACAGAGACGAAGACGATGATAGAGACGAACCCAAAGAAGGTGCAGTTGAAGTCGGAACTCGCAGACCTCGAGGCCGACCACCTGGTTCCAAGAACAAACCAAAACCGCCCATCTTTGTGACCCGAGACAGCCCAAATGCTCTACGAAGCCACGTCATGGAGGTCGCCGGCGGAGCCGATGTAGCAGAAAGCGTAGCTCAGTTCGCTCGCCGCCGTCAACGTGGGGTTTGTGTGCTTAGTGGAAGTGGCTCCGTCGCTAACGTCACTCTTCGCCAACCTGCAGCTCCGGGAGCTCTTGTGGCTCTCCATGGAAGGTTTGAGATTCTATCCCTAACCGGAGCCTTCTTGCCCGGACCGGCACCACCGGGATCCACGGGACTAACAATTTACCTCGCCGGAGGACAAGGCCAGGTTGTCGGTGGAAGCGTGGTGGGGTCACTAGTGGCAGCAGGACCAGTGATGGTCATTGCTGCAACTTTTGCAAATGCAACTTATGAGAGACTACCTCTTGATGATGAAGACGAGGGCGGCAGCGCCGCTGGGCAAGGCGGTGGAAGCGGAGGCGGAGGGTCTTCCCCGCAGGCACAGCCGGGGATCGGAAGCAGTGGGGGCCACTTGCAAGGAGGGATTCCAGATCCTTCATCACTTCCTTTGTATAATCTGCCACCAAATCTGCTTCCCAATGGTGGTGGTGGTGGGCAGGTAGGTCATCATCATGAAGCTCTTGCTTGGGCAGCTCATGGAAGGCAACCTTTTTAG 1155 0.5368 MANRVYGDGIWRKEGGKERGDRHDRKELHRKTRAKLFNLDPSTSSSPFGIDRFLFLGVDLIFCADPSSSPSFFFVSFNYNLSLQLAILANPWWTGQVGLPGVDPAANSPSVNKRHNTDLSINESSGKNSGGNNRDEDDDRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGALVALHGRFEILSLTGAFLPGPAPPGSTGLTIYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDEDEGGSAAGQGGGSGGGGSSPQAQPGIGSSGGHLQGGIPDPSSLPLYNLPPNLLPNGGGGGQVGHHHEALAWAAHGRQPF 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2273g00003 384 Gene3D - 180 308 - -
Pral2273g00003 384 CDD DUF296 181 264 IPR005175 -
Pral2273g00003 384 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 124 377 IPR014476 GO:0003680
Pral2273g00003 384 MobiDBLite consensus disorder prediction 109 129 - -
Pral2273g00003 384 MobiDBLite consensus disorder prediction 317 333 - -
Pral2273g00003 384 MobiDBLite consensus disorder prediction 302 369 - -
Pral2273g00003 384 MobiDBLite consensus disorder prediction 130 152 - -
Pral2273g00003 384 Pfam Plants and Prokaryotes Conserved (PCC) domain 181 293 IPR005175 -
Pral2273g00003 384 SUPERFAMILY AF0104/ALDC/Ptd012-like 178 305 - -
Pral2273g00003 384 ProSiteProfiles PPC domain profile profile. 177 314 IPR005175 -
Pral2273g00003 384 MobiDBLite consensus disorder prediction 104 178 - -
Pral2273g00003 384 FunFam AT-hook motif nuclear-localized protein 180 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2273g00003 Pral-Chr2273 37144 43515 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2273g00003 88 384 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 60.667 3.76e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2273g00003 - - var:108341460 349.747