Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2271g00004 ATGGCTGTCGACGCGCTTCATCTTCGTCGCGATTCCCTCCCCGGCCCTCCCTCCGATCCTCCCCCCCTCCCGCCCAAGGCCCTCCATTTCGGCTCTCCGGTATCTAAGGAGGCGCATTTTAGAGGCGTGCGTAAACGTCCCTGGGGCCGATTCGCCGCCGAGATCCGCGATCCCTGGAAGAAGACGCGCAAGTGGCTTGGAACCTTTGATACCGCTGAGGAGGCGGCCCGGGCCTACGATGAGGCTGCCAGGAGTCTTCGTGGCCCCAGGGCAAAGACGAACTTCGTCTATGCCGCTGTTGCCGTTGCTCCGTCTGTCCCGATGTCACCGGCGGCGGCCTCTACCGCTAGTGGCGGTGTTGGTAATGGTGGAGAGATGTTTGGTAGGCGCGTGGGGTTTTGGAGGGCTCCGGTGTATCATGCGGCGGACGCCACGGCGGGAGTGCCGGGGAGATCGGAGTATAAGGGATACAAGTTGGAGAATGTGGATTTGGTGATGGGAGAGGAGAGAAAGATGCGGAAAGAGAAGAAACCGTTGATGCTTGATCTTAACCAACCACCACCACTCTTCTAG 573 0.6021 MAVDALHLRRDSLPGPPSDPPPLPPKALHFGSPVSKEAHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARSLRGPRAKTNFVYAAVAVAPSVPMSPAAASTASGGVGNGGEMFGRRVGFWRAPVYHAADATAGVPGRSEYKGYKLENVDLVMGEERKMRKEKKPLMLDLNQPPPLF 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2271g00004 190 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 MobiDBLite consensus disorder prediction 1 31 - -
Pral2271g00004 190 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Pral2271g00004 190 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 MobiDBLite consensus disorder prediction 14 28 - -
Pral2271g00004 190 CDD AP2 38 95 IPR001471 GO:0003700|GO:0006355
Pral2271g00004 190 Gene3D AP2/ERF domain 38 97 IPR036955 GO:0003700|GO:0006355
Pral2271g00004 190 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 35 140 - -
Pral2271g00004 190 FunFam Ethylene-responsive transcription factor 2 38 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2271g00004 Pral-Chr2271 25873 26445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2271g00004 36 95 AP2-EREBP Transcription Factor Family AT1G50640 86.667 7.80e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral2271g00004 AP2 4.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2271g00004 K09286 - qsa:O6P43_006945 202.601