Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral226g00003 ATGGCAGGCATCCGAGTGGTCTCCACAACTACAATCCAAGCACGAAGTCAAATTAATAATGGTGATTCGCTTAAAGAAATCGAGCTCAATCCCTGGGATCTTCAGTTTCTGCTAAGTGAATATGGCCAAAAAGCTGTTCTTTTCCACCAACCAACCTTATCTTCTTCTTCTTACATAAGGAAAACGATCCAGCACCTTAAGGACTCTCTTTCTTCCTCCCTCGACTTCTACCCGCCCCTTGCCGGCCGTTTTGTTATCGCCCATCACGGCGGCGATGATGATACCTTCTCTGTCTCAGTCACTTGCAACAACGCCGGAGCAAGTTTTGTTCATGCTATTGCTGAGAACATCACAATTGCAGATATTATTGAATCGCCTTATGTTCCGCCATTTGTCCACTCCTTCTTCCCGCTGTACAGATCCAAGAACATCGAAGGAAGTCGGATCCCGTTATTGGCCGTCCAAGTTACTGAGCTCGTCGACGGCATCTTCATGGCTTGTTCGATTAACCATTGTCTTGCTGATGTAAAGCCCTTCTGGGATTTCTTGAACACATGGGCTAACATCTCCCGACATGGTTTAAACCACATAGAGTCCAATTCGAAGCTGGCTTCATTCAAGCGATGGTTTCCCCAAGGTAAAATAGCTCGCCCTGTACGAATCCCATTAAGAGAAATCATGGAGAGTGATGGTAAACTTAAGGGATCCATTGGTTCGCATCAGGCTTTTCCATTCTCTCAAAGGATCTTCCACTTTAAAAGTAAAAAAATCGTTGAATTAACAGAAAAAGCTAACTTAGAGGTAGCAGATGGCCACATCAGCCACAAAATCTCCTCCTTGCAAGCTCTTACCAGCCACGTTTGGAGATCTATGATCAAAAACCAGCATCTTGATCCAGAAGAAGTGGTTACTTACAGATTCTTCGTAGCTGCTGGACCCAGAATTTCTGATCCACCAATACCTAGAAACTATTTTGGACCCACTGTTCAACATGCCTTTTTGACGATGAAAGTAAGAGACTTGGTGGGAGATAGAGGGCTTGGCAAGTTTGCTTTGGAGATGAACAGGGTGATATCCTCGTTCACAGAGGAAAATATCAAGAAGGACTTCGAAGCATGGGCTAGAAATCCCACGATGCCATTACAGAGTGGCCCAATCGGGAAGTTTATGGGAACTAGCAGTTCTCCAAGGACCAACTTTTACGCCATTGATTTTGGGTGGGGAAGACCGGTGGCAGTTCATAGCTGCCTTCCTAGTCCAAAGAATTGGAAGCTAGTGGTTGATGCCGGAGCAGAAGAAGATAGTTTAGAAATTGAGGTGTATGCTTCCTTTGAGATGCTTGAAGCTCTAGCAAGTGACACTGAATTCATGCGCGCGGTGTCTCCGAGGCCGGTGCCGGCGCCGGCGGGAGGGATATCCAGTAAACTAGCACAAGCTCGATTGTGA 1446 0.4599 MAGIRVVSTTTIQARSQINNGDSLKEIELNPWDLQFLLSEYGQKAVLFHQPTLSSSSYIRKTIQHLKDSLSSSLDFYPPLAGRFVIAHHGGDDDTFSVSVTCNNAGASFVHAIAENITIADIIESPYVPPFVHSFFPLYRSKNIEGSRIPLLAVQVTELVDGIFMACSINHCLADVKPFWDFLNTWANISRHGLNHIESNSKLASFKRWFPQGKIARPVRIPLREIMESDGKLKGSIGSHQAFPFSQRIFHFKSKKIVELTEKANLEVADGHISHKISSLQALTSHVWRSMIKNQHLDPEEVVTYRFFVAAGPRISDPPIPRNYFGPTVQHAFLTMKVRDLVGDRGLGKFALEMNRVISSFTEENIKKDFEAWARNPTMPLQSGPIGKFMGTSSSPRTNFYAIDFGWGRPVAVHSCLPSPKNWKLVVDAGAEEDSLEIEVYASFEMLEALASDTEFMRAVSPRPVPAPAGGISSKLAQARL 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral226g00003 481 Coils Coil 476 481 - -
Pral226g00003 481 Pfam Transferase family 5 457 - -
Pral226g00003 481 Gene3D - 2 216 IPR023213 -
Pral226g00003 481 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 457 - -
Pral226g00003 481 Gene3D - 228 452 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral226g00003 Pral-Chr226 14706 16661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral226g00003 30 422 Monolignol Biosynthesis Gene Families AT5G48930 25.641 1.07e-12 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral226g00003 - - pcin:129321848 709.523