Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2263g00012 ATGGAAGTGATAAGTATGAAGAAAGATCAGAAGATGGGTTTCGAGGAAACAGAACTGAGGCTGGGCTTGCCTGGAAATAATGGAGGCTCCGAAACAGAAGTGGTGAGAAAGAGAGGTTTCTCTGAAACTGAATCAGAAACTGTGGACTTGATGTTGAATCTCTCATCCTCAAAGGAATCAGCAGATCCAACTGATAACCTCAAGGCTTCGCCCAAGGAGAAGACCCTTCTGCCTTCTGATCCTGCCAAGCCTCCCGCCAAGGCGCAAGTGGTGGGTTGGCCACCAGTGAGATCCTTCAGAAAGAACATACTAAAGAACAGTGGAGAAGAGAACGAGAAGGGAAGCCCTAATAATGGAAGCTTCGTGAAAGTAAGCATGGATGGAGCTCCTTACCTTCGCAAAGTGGACCTCAAGTTGTACAACACGTACCAAGATCTCTATGATGCCTTGGCCAAAATGTTTAGCTCCTTTACCATTGGCAATTGTGGATCCCAAGTAATGAAGGACTTCATGAACGAGAGAAAGCTGATGAATCTCTTGAGCAGCTCCGACTATGTCCCAACCTATGAAGACAAGGATGGCGACTGGATGCTTGTGGGCGACGTACCTTGGGAGATGTTTGTTGAATCATGCAAGCGTTTGCGTATCATGAAAGGCAAGGAGGCTATCGGACTTGCACCGAGGGCCGTGGAGAAATGCAAGAACAGAAGCTAG 714 0.4748 MEVISMKKDQKMGFEETELRLGLPGNNGGSETEVVRKRGFSETESETVDLMLNLSSSKESADPTDNLKASPKEKTLLPSDPAKPPAKAQVVGWPPVRSFRKNILKNSGEENEKGSPNNGSFVKVSMDGAPYLRKVDLKLYNTYQDLYDALAKMFSSFTIGNCGSQVMKDFMNERKLMNLLSSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLAPRAVEKCKNRS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2263g00012 237 MobiDBLite consensus disorder prediction 46 64 - -
Pral2263g00012 237 Gene3D - 114 231 - -
Pral2263g00012 237 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 12 224 IPR003311 GO:0005634|GO:0006355
Pral2263g00012 237 MobiDBLite consensus disorder prediction 1 16 - -
Pral2263g00012 237 MobiDBLite consensus disorder prediction 1 89 - -
Pral2263g00012 237 FunFam Auxin-responsive protein 114 229 - -
Pral2263g00012 237 ProSiteProfiles PB1 domain profile. 119 219 IPR000270 GO:0005515
Pral2263g00012 237 SUPERFAMILY CAD & PB1 domains 115 218 - -
Pral2263g00012 237 Pfam AUX/IAA family 16 228 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2263g00012 Pral-Chr2263 52042 54843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2263g00012 109 227 B3 DNA Binding Superfamily AT4G23980 31.933 1.89e-08 52.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral2263g00012 AUX_IAA 2.4e-80 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2263g00012 K14484 - gmx:100810013 354.369