Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral225g00003 ATGGCATTGGACATCACAATGAAGATAATATCATTTTCTCAGCGGCCGCGAGCTATATGCACTTCTGCAAGTGGAGTTATATCAAGCGTCATGCTTCGGCAGGCTGATTCTTGGGGTACATTGACACATGAGGGACGGTTTGAAATTTTGTCATTATCTGGCTCATTCATGCCGAATGAAAGTGCAGGAACACGAAGCAGATCGGGTGGCATGAGTGTTTCTTTAGCAAGTCCAGATGGGCGCGTCATAGGGGGTAGTGTAGCTGGTTTGTTGGTAGCAGCAAGTCCTGTGCAGGTTGTGGTTGGCAGTTTTCTGGCTGGAAACCAGCATGATCTGAAGACAAAGAAACAGAAACATGAGATTGTATCAACAGCAATTGTTCCTTTGTCTACTGCTGATCCAATACCTATCCTGTCATCTCCACCTTCCTTCCCTGCTCACAATTGGTCTGCATTGCCTTCTGATACGAGGAACAACATGACCACTGACATTAATGTGCCTCTATCTGCAGGGTAA 516 0.4612 MALDITMKIISFSQQXPRAICIXSASGVISSVMLRQADSSXGTLTHEGRFEILSLSGSFMPNESAGTRSRSGGMSVSLASPDGRVIGGSVAGLLVAASPVQVVVGSFLAGNQHDLKTKKQKHEIVSTAIVPLSTADPIPILSSPPSFPAHNWSALPSDTRNNMTTDINVPLSAG 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral225g00003 174 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 128 IPR039605 GO:0003680
Pral225g00003 174 ProSiteProfiles PPC domain profile profile. 1 131 IPR005175 -
Pral225g00003 174 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 107 IPR005175 -
Pral225g00003 174 CDD DUF296 4 107 IPR005175 -
Pral225g00003 174 Gene3D - 3 127 - -
Pral225g00003 174 SUPERFAMILY AF0104/ALDC/Ptd012-like 4 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral225g00003 Pral-Chr225 47591 50139 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral225g00003 4 169 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 68.208 6.41e-69 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral225g00003 - - qsa:O6P43_024280 242.662