Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2259g00004 ATGGCCCAACAACAAATTTTTTTAGTCTTTCTACTTCCTCTTACTTGCTTTGTGTTTTGTACACTCTGTTCCGTCACCTCAGGACTCGCGGAAACTGAAGCTCTTCTCAAGTGGAAACAGGGTCTCCCAAAGCAACCAGCTTTGGATTCATGGGTCTCTCCACCAGAGGCTAACTCCAGTGGAGCTCAAACCCCATGTTCATGGCGTGGAATTAATTGTGATTCTTCAGGGAGGGTGATTGAACTCAACTTGAACAATACTGGTCTTGAAGGTACCATTGAAAAGTTGAACTTCTCAGCATTACCAAATCTTCTTACTCTCAATCTTCAAGATAACAAACTCAGTGGCAATATACCAGAAGGCATTGGAGTGCTCTCGAAGCTCCAATTTCTATCTCTAGATAAAAACCACTTTTCTGGGTCTATACCCCAATCTCTAGGCAACTGTACAGATCTAAGAGTTCTCTCAATGGCTTTAAACAATCTCTCAGGCATAATTCCACCTAGTATTGGTAGATTGACCAATCTAACTGATGTTCGCTTTCATCGCAACCATTTACATGGCGATTTGCCACAAGAGTTTGGAAATGTTTCGTCTTTGATTGTTGTTCATCTGTCATATAACAACTTCAGTGGCCATCTACCACCTCAAGTGTGCAGAGGCGGCAAGCTTGTGAATTTCACTGCAGCTTATAATAGTCTCTCTGGTCCAATCCCAATGAGTTTGAGAAACTGTTCATCTCTTTATAGAGTTCAACTTCAACATAACCAATTGACAGGTCATGTAGATCAGGATTTTGGAGTTTATCCTGATCTCACTTACATTGACATCAGCTTCAACAGAGTGCGGGGTGAGCTCTCTGCAAACTGGGGTTCCTGCCAAAGCTTAGAAGCTCTTATCATGGCTGGCAATTCAATCAGGGGAAATATTCCAGGTGAGATGTTTCAATTGAAACAACTACAAAAGCTTGACTTATCATGGAACCATATATCTGGCGAGATACCAACACAAATCAGAAATGCCTCCATGTTATACCTTTTAAAGTTAGACAGAAACAATATTTCAGGTATGATGCCTGCAAGCATTGGAAGTCTTTCTAATTTGGAGTTATTAGACCTGTCAATGAATAGGCTCAGTGGATCTATCCCTTATCAATTAGGGAATTGCTACAAGCTGCTCAACTTAAATTTGAGTCATAATGACTTCAATAGCCAAATCCCTTATCAAATTGGGAATCTTTACTCCCTAGAAGATTTTTTGGACTTGAGTTATAATTCACTTTCTGGAAAAATCCCTGTTGATCTTAGTAAGCTCAACAACTTGATAAATATGAATCTGTCTCATAACAATTTATCAGGTTCTATCCCCGATTCCCTTAGTACAATGTTGAGCTTGTCGAGCATCAACCTCTCTTACAACAATTTGGAGGGTCCTGTACCAAATAGTGGCATATTTGATATATCTTATCAATCAGATCTGAGTAATAACAAAGATTTATGTGGGAGAATCCATGGTTTGAGATCTTGCAATGTTTCAATATCGCATTGGAGAAGCAACAAAGGCAAAGCTGTGATATCTATTGTTGCTTCTTTAGCAGGTCTACTACTTGTTTCATTGGTGTTAGTTGGGATTTTTGTTGTTTGTTCAAAACTAAAGTCAAGAATTATAGAACAGAATTCAGGAATCATGAAGGAAAGTACATTTTCAATCTTACATTTTGATGGGAAAAATCTGTATGATGACATAATTGAAGCAACTGAGAACTTTGATGACAAGTATTGTATAGGGCAAGGAGCTTCTGGAAAAGTTTACAAAATGGTCATGCAAGGAGGTGAAAAACTTGCGATAAAGAAGTTTAGATGTGAAGAATATGATTTAGATCTTCAAATTTTAAAAGCCTTCAAAAGTGAGATTGAAGCAATGACAGAAATTCGCCATCGAAACATTGTGAAGCTCTACGGGTTTTGCTCACAAAGATCACACACTTTTGCTGTTTATGAGTACATGGAAGGTGGGACTTTAGCTGATTTTCTGAAAAATGACACAAAGGCATTAAAGTTAGATTGGCTTAAGAGGGTGGATATTGTCAAATGCGTAGCAGAAGCTTTATCTTATATGCATCATGATTGTGATCCGCCAATTATTCATAGAGACATATCAAGCAAAAATATATTATTGTCTGCAAATCTTGAAGCCCATGTGTCAGATTTTGGCACAGCAAAGTTCTTGAAGTCTAACTCATCAGTTTTGACGGCATTTGCTGGTACACTTGGCTATGCTGCTCCAGAGCTTGCGTATACGCTAACGGTGTCTGAGAAATGTGATGTGTTTAGCTTTGGCGTATTGGCTTTTGAAATTCTCATGGGAGAGCATCCTGGTGATCTAATTTCTCATGTACACGCCTTTGATGATGATCCAAACATCAACTTCAAAGAGATTTAG 2442 0.3862 MAQQQIFLVFLLPLTCFVFCTLCSVTSGLAETEALLKWKQGLPKQPALDSWVSPPEANSSGAQTPCSWRGINCDSSGRVIELNLNNTGLEGTIEKLNFSALPNLLTLNLQDNKLSGNIPEGIGVLSKLQFLSLDKNHFSGSIPQSLGNCTDLRVLSMALNNLSGIIPPSIGRLTNLTDVRFHRNHLHGDLPQEFGNVSSLIVVHLSYNNFSGHLPPQVCRGGKLVNFTAAYNSLSGPIPMSLRNCSSLYRVQLQHNQLTGHVDQDFGVYPDLTYIDISFNRVRGELSANWGSCQSLEALIMAGNSIRGNIPGEMFQLKQLQKLDLSWNHISGEIPTQIRNASMLYLLKLDRNNISGMMPASIGSLSNLELLDLSMNRLSGSIPYQLGNCYKLLNLNLSHNDFNSQIPYQIGNLYSLEDFLDLSYNSLSGKIPVDLSKLNNLINMNLSHNNLSGSIPDSLSTMLSLSSINLSYNNLEGPVPNSGIFDISYQSDLSNNKDLCGRIHGLRSCNVSISHWRSNKGKAVISIVASLAGLLLVSLVLVGIFVVCSKLKSRIIEQNSGIMKESTFSILHFDGKNLYDDIIEATENFDDKYCIGQGASGKVYKMVMQGGEKLAIKKFRCEEYDLDLQILKAFKSEIEAMTEIRHRNIVKLYGFCSQRSHTFAVYEYMEGGTLADFLKNDTKALKLDWLKRVDIVKCVAEALSYMHHDCDPPIIHRDISSKNILLSANLEAHVSDFGTAKFLKSNSSVLTAFAGTLGYAAPELAYTLTVSEKCDVFSFGVLAFEILMGEHPGDLISHVHAFDDDPNINFKEI 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2259g00004 813 ProSitePatterns Tyrosine protein kinases specific active-site signature. 714 726 IPR008266 GO:0004672|GO:0006468
Pral2259g00004 813 SMART LRR_typ_2 101 123 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 317 341 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 365 389 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 438 462 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 197 221 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 125 149 IPR003591 -
Pral2259g00004 813 SMART LRR_typ_2 173 196 IPR003591 -
Pral2259g00004 813 Gene3D Transferase(Phosphotransferase) domain 1 669 810 - -
Pral2259g00004 813 ProSitePatterns Protein kinases ATP-binding region signature. 595 618 IPR017441 GO:0005524
Pral2259g00004 813 FunFam Nuclear pore complex protein NUP107 29 191 - -
Pral2259g00004 813 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 198 513 - -
Pral2259g00004 813 Pfam Leucine rich repeat 271 330 IPR001611 GO:0005515
Pral2259g00004 813 Pfam Leucine rich repeat 344 402 IPR001611 GO:0005515
Pral2259g00004 813 SUPERFAMILY RNI-like 160 478 - -
Pral2259g00004 813 Pfam Protein kinase domain 592 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2259g00004 813 Gene3D Phosphorylase Kinase; domain 1 549 668 - -
Pral2259g00004 813 ProSiteProfiles Protein kinase domain profile. 589 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2259g00004 813 Gene3D Ribonuclease Inhibitor 198 512 IPR032675 -
Pral2259g00004 813 PANTHER LEUCINE RICH REPEAT KINASE 2 80 797 - -
Pral2259g00004 813 Gene3D Ribonuclease Inhibitor 29 194 IPR032675 -
Pral2259g00004 813 FunFam Leucine-rich repeat receptor protein kinase MSP1 552 668 - -
Pral2259g00004 813 Pfam Leucine rich repeat N-terminal domain 31 74 IPR013210 -
Pral2259g00004 813 SUPERFAMILY L domain-like 79 190 - -
Pral2259g00004 813 SUPERFAMILY Protein kinase-like (PK-like) 576 800 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2259g00004 Pral-Chr2259 51123 53754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2259g00004 81 762 Receptor kinase-like Gene Family AT4G08850 44.803 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2259g00004 Pkinase 5.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2259g00004 - - gmx:100814345 910.598