Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2254g00004 ATGGAAAGTGGAGCAAAGGGATGTGAGGTCATTGTAAGTGGAAAACTGAGGGCTCAGCGTGCCAAATCCATGAAGTTCAAGGATGGATATATGATTTCATCTGGTCAGCCAGTCAAGGACTATATTGATTCTGCAGTAAGACATGTTCTCCTCAGACAGGGGGTTCTTGGTATCAAGGTCAAGATCATGCTTGATTGGGATCCTAAGGGAAAGCAGGGTCCTAAAACTCCTATTCCTGATGTTGTCACAATCCACCCTCCAAAGGATGAAGAAGAATACATCCGGCCTGGTGCTGTTGTGGCAGCTGATATGGATGTCCCAGTCGTGCCTGTCGCTTGA 339 0.469 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPIPDVVTIHPPKDEEEYIRPGAVVAADMDVPVVPVA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2254g00004 112 ProSitePatterns Ribosomal protein S3 signature. 21 57 IPR018280 -
Pral2254g00004 112 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 76 - -
Pral2254g00004 112 FunFam 40S ribosomal protein S3 1 93 - -
Pral2254g00004 112 Pfam Ribosomal protein S3, C-terminal domain 1 62 IPR001351 GO:0003735|GO:0006412
Pral2254g00004 112 SUPERFAMILY Ribosomal protein S3 C-terminal domain 1 65 IPR036419 -
Pral2254g00004 112 Gene3D - 1 93 IPR036419 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2254g00004 Pral-Chr2254 35644 36443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2254g00004 1 112 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 76.786 2.73e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2254g00004 K02985 - zof:122002924 192.2