Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2254g00001 TTCACTCCTTCCTTGTTTCTCACCTTCATCAACCAGATCAATCACCCATCATTCAGCTCTCATGGCTTCCGCTTGTGCTTCTTCCGCCGTCGCATCGCCACCCCAAGTTCTCAGAAGAATGGAAGCATCTTGGGAACAAGGACTTCGTTTCTGAGCGGAAGGAAGTTGAGGGTGAACAAGTTTACAGTCGGAGGACGATCTGTGAGTAGCAGAGTGTGTGCGGCGGCGGCTGATCCTGACAGACCTCTCTGGTTCCCAGGAAGCACCCCTCCTCCATGGCTTGACGGCAGCCTTCCCGGAGACTTCGGCTTTGATCCTCTCGGTCTCGGATCTGATCCAGAGAGCCTGAGATGGAATGTTCAAGCGGAGCTGGTTCATTGCAGATGGGCAATGCTGGGTGCTGCTGGAATTTTCATCCCAGAGTTCCTAACAAAGATTGGTATTCTCAACACTCCTTCGTGGTACTCTGCTGGAGAGCTGGAATACTTCACAGACACCACCACCCTCTTCATCATTGAGCTCATCTTCATTGGATGGGCCGAGGGAAGAAGATGGGCCGACATCCTCAAGCCCGGCAGCGTCAACACCGACCCGATCTTCCCCAACAACAAGCTCACAGGAACCGATGTGGGTTACCCGGGTGGGCTCTGGTTTGACCCATTGGGCTGGGGCTCTGGCTCACCTGAGAAGGTCAAAGAGTTGAGAACAAAAGAGATTAAGAATGGAAGATTGGCCATGTTGGCTGTGATGGGTGCTTGGTTCCAGCACATCTACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACTTAGCAGACCCTGGCCATGCCACCATTTTTGCTGCTTTTTCACCCAAGTGA 861 0.5285 FTPSLFLTFINQINHPSFSSHGFRLCFFRRRIATPSSQKNGSILGTRTSFLSGRKLRVNKFTVGGRSVSSRVCAAAADPDRPLWFPGSTPPPWLDGSLPGDFGFDPLGLGSDPESLRWNVQAELVHCRWAMLGAAGIFIPEFLTKIGILNTPSWYSAGELEYFTDTTTLFIIELIFIGWAEGRRWADILKPGSVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKVKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFSPK 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2254g00001 286 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 68 282 IPR001344 GO:0009765|GO:0016020
Pral2254g00001 286 Gene3D Chlorophyll a/b binding protein domain 91 276 - -
Pral2254g00001 286 FunFam Chlorophyll a-b binding protein, chloroplastic 91 276 - -
Pral2254g00001 286 SUPERFAMILY Chlorophyll a-b binding protein 74 283 - -
Pral2254g00001 286 Pfam Chlorophyll A-B binding protein 90 256 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2254g00001 Pral-Chr2254 17904 19629 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2254g00001 69 286 Chloroplast and Mitochondria Gene Families AT3G61470 89.908 7.29e-148 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2254g00001 K08908 - gmx:100784089 482.641