Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2245g00011 ATGGAAGAAGCACAGAATTCAGAACCAACCCGCATTCCCATACCCGCATTCCTCTCCAAACCAGACAATGCCTCTGTCCCCCACTTGCCCCCCACCGCAGATCACTCTCTCCGGCCACTCCACAAGCGCCGCCGCAGCAGCAGAGACCAAACCACCACTACCGGGAAGAAGACGAAGACGATAAAGGAAGATCGCTGTGATGATGAGAAAGTAGAAGAAGATCATGAAGCGGGAGAAGAAGAAGACAAGGAGGAGATAGAGAGGAAGATAGAGGCATTACAGAGGATAGTTCCCGGCGGCGAGTCCTTAGGAATGGACAAGCTGTTTGATGAAACTGCAGATTATATAATGGCATTGAAGTACCAAATCAAAGGCTTAAGAGCTCTCTCAAGCTTATTCGAGAGGTTAGAGAAGGACAAGTCCAAACTTGGAGGTTGA 438 0.4932 MEEAQNSEPTRIPIPAFLSKPDNASVPHLPPTADHSLRPLHKRRRSSRDQTTTTGKKTKTIKEDRCDDEKVEEDHEAGEEEDKEEIERKIEALQRIVPGGESLGMDKLFDETADYIMALKYQIKGLRALSSLFERLEKDKSKLGG 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2245g00011 145 Coils Coil 76 96 - -
Pral2245g00011 145 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 32 133 IPR044660 GO:0006355
Pral2245g00011 145 MobiDBLite consensus disorder prediction 46 72 - -
Pral2245g00011 145 CDD bHLH_AtIBH1_like 88 129 IPR044549 GO:0006355
Pral2245g00011 145 MobiDBLite consensus disorder prediction 1 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2245g00011 Pral-Chr2245 39160 39842 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2245g00011 86 137 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G05800 36.538 8.13e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2245g00011 - - pcin:129298466 172.17