Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2245g00002 ATGGCTAAGGTCTGTTTAAGGCCAATTTTCTGTGTCTTCCTCCTCCTCGTCGTCCTAATAGCCCTAATATCTCATCATGGCACTGATGCTCAGCCAAACTTCCTAAAATCCTTCTGTGGAAACGACACAACTAATAGCAATAGTACCTACCAAACCAACCTCCAAGCCCTCTTGCTAAACATCTCTTTCAACATACAAATCGACTATGGCTTCTACAACTTCTCCTCCGGCGAGAACTCCGGCAAAGTCAACGTCATCGCACTATGCCGAGGAGACGTTTCAGCACAAGATTGCCGCAGCTGTATCTCAGATTCGAGGGTTGTTCTTCCTCAAGTTTGCCCTAACATGAAGGAGGCAATCGGCTGGCATGACTTCTGCTTCCTCCGATACTCCGACCGATCCATATTCGACGTCATGGAAACTTCGCCTTCTTTCTCTTTGTGGAGCACTCACGACGCGTTGCAGAAAGATCAGTTCAAGAACGTACTTGCGCAGTTGATGAGTTCTTTGAGAGTAACCGCAGCAACGGGAGACTCGATGAGGAAGTTCGCGGCGGCGAATGTGAGCGGTCCTAGCAATCAGACGATATTTGGGCTGGCACAGTGCACGCCGGACTTGTCCAACGACGATTGCAACGTTTGCTTGAATTGGGCGATCAATCAAATTCCTAAATGTTGTGATGGGCAGACAGGCGGTAGAGTGGCAACGCCCAGTTGCAATGTTAGATATGAGACTTACAAATTCTTTGGCGGCGGCACGTCGTCACCACTTTTGCCAGCCCCGCCATTGCCACCACCGCCTCATCCTCCCTTTGGTCAACCCGTGTCCAAGCAAGGAAAGAGCAATAATACATCACGAATTGTTATTGCCATAGTTGTGCCATTTGTCTCAATCGCAGTGCTCATCTCTATTGTCGTAATTTACTTAAAATTCAAAGTCAGGAGGCCTCAGAATATTGACACCGAAGCTAAGGATGTTGCTGACTCATTGCAAATGGACTTTGAAACAATCAGAGAGTCAACAAATGATTTTTCTGACAAAAATAAGCTTGGACAAGGTGGATTTGGACCTGTTTACTTGGGTAGGTTGTATAATGGACAAGAGATAGCAGTAAAAAGGTTGAGTAGGGAATTTGGTCAAGGTGATATGGAGTTCAAGAATGAAGTGTTACTAATGGCCAAGCTTCAACATCGCAATTTAGTCAAGCTACTTGGTTTCTCTCTCAAAGATAAAGAAAGGCTACTTGTTTATGAGTTTGTTCCAAACAAAAGCCTTGATTACTTCATCTTTGATCCAATAAAGGCCACAGCATTGAATTGGGAAAAGCGTTACAAAATCATTGAAGGCATTGCACGAGGTCTTCTTTATCTCCATCAAGATTCTCGAATTCGAATTATTCATCGTGACCTCAAAACAAGTAATATACTTTTGGATGAAGAGATGAATGCTAAGATATCGGATTTTGGAATGGCAAGACTACTTGTAATGGATCAAACTCAAGCCAAAACAAATAATATTGTTGGCACCTATGGATATATAGCACCAGAATATGCAAAGCATGGAAGATTTTCAATGAAGTCGGATATCTTTAGTCTCGGAGTACTGATTTTAGAAATCATAAGCGGCAAGAGAAATAGTGAATATGAAGATTGGGAAGATCTAGAGCATATAGGAAGCGCAGCTTGGAAAAGCTGGAGAAAAGGGACATTGTCAAGTATTATAGACCCCAGGCTGATTGAAGAAGGTGGTTCTTCAAGAAATGAGATAATGAGATGCATCCAAATAGGGTTATTGTGTGTTCAAGAGAAGGCAAGTGATAGGCCAACAATGGACACTATTGTGGCAATGTTGAGTGCTTATTCATTCTCTCTACCCATTCCTCTGCAGCCTTCCTTTTATATACAAGGAGGCTTACCAGATGATGTTTTTATTACATCTTCATCATCGTCTCAAGAAGATCAGTCCGCAGTTGAAGCTTCAAGAAATGAACTCTCAATTTCAGAACAGTATCCACGTTAG 2019 0.4289 MAKVCLRPIFCVFLLLVVLIALISHHGTDAQPNFLKSFCGNDTTNSNSTYQTNLQALLLNISFNIQIDYGFYNFSSGENSGKVNVIALCRGDVSAQDCRSCISDSRVVLPQVCPNMKEAIGWHDFCFLRYSDRSIFDVMETSPSFSLWSTHDALQKDQFKNVLAQLMSSLRVTAATGDSMRKFAAANVSGPSNQTIFGLAQCTPDLSNDDCNVCLNWAINQIPKCCDGQTGGRVATPSCNVRYETYKFFGGGTSSPLLPAPPLPPPPHPPFGQPVSKQGKSNNTSRIVIAIVVPFVSIAVLISIVVIYLKFKVRRPQNIDTEAKDVADSLQMDFETIRESTNDFSDKNKLGQGGFGPVYLGRLYNGQEIAVKRLSREFGQGDMEFKNEVLLMAKLQHRNLVKLLGFSLKDKERLLVYEFVPNKSLDYFIFDPIKATALNWEKRYKIIEGIARGLLYLHQDSRIRIIHRDLKTSNILLDEEMNAKISDFGMARLLVMDQTQAKTNNIVGTYGYIAPEYAKHGRFSMKSDIFSLGVLILEIISGKRNSEYEDWEDLEHIGSAAWKSWRKGTLSSIIDPRLIEEGGSSRNEIMRCIQIGLLCVQEKASDRPTMDTIVAMLSAYSFSLPIPLQPSFYIQGGLPDDVFITSSSSSQEDQSAVEASRNELSISEQYPR 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2245g00002 672 Gene3D Phosphorylase Kinase; domain 1 308 419 - -
Pral2245g00002 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 465 477 IPR008271 GO:0004672|GO:0006468
Pral2245g00002 672 Pfam Salt stress response/antifungal 155 246 IPR002902 -
Pral2245g00002 672 Pfam Salt stress response/antifungal 39 132 IPR002902 -
Pral2245g00002 672 MobiDBLite consensus disorder prediction 257 279 - -
Pral2245g00002 672 FunFam Cysteine-rich receptor-like protein kinase 10 143 248 - -
Pral2245g00002 672 SMART serkin_6 344 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2245g00002 672 ProSiteProfiles Gnk2-homologous domain profile. 32 135 IPR002902 -
Pral2245g00002 672 MobiDBLite consensus disorder prediction 646 672 - -
Pral2245g00002 672 ProSiteProfiles Protein kinase domain profile. 344 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2245g00002 672 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 135 - -
Pral2245g00002 672 ProSiteProfiles Gnk2-homologous domain profile. 141 248 IPR002902 -
Pral2245g00002 672 FunFam Cysteine-rich receptor-like protein kinase 10 310 419 - -
Pral2245g00002 672 Gene3D - 31 134 IPR038408 -
Pral2245g00002 672 Gene3D - 142 248 IPR038408 -
Pral2245g00002 672 Pfam Protein kinase domain 345 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2245g00002 672 FunFam cysteine-rich receptor-like protein kinase 10 420 624 - -
Pral2245g00002 672 MobiDBLite consensus disorder prediction 257 273 - -
Pral2245g00002 672 CDD STKc_IRAK 350 617 - -
Pral2245g00002 672 Gene3D Transferase(Phosphotransferase) domain 1 420 623 - -
Pral2245g00002 672 SUPERFAMILY Protein kinase-like (PK-like) 330 617 IPR011009 -
Pral2245g00002 672 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2245g00002 Pral-Chr2245 14712 18937 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2245g00002 9 672 Receptor kinase-like Gene Family AT4G21410 45.547 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2245g00002 Pkinase 3.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2245g00002 - - gmx:113000773 720.309