Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2244g00011 ATGAATCGAGAACAGAAGCGAGGGAAGCAAGAAAAAGATTCTGATGGTGCTGAGAAGGTCATTGTTGCCGTTAAGGCATCGAAGGAAATCCCTAAGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATTATTTTGTTAGTGGTTTTGCCTCCACAAAGCTCAGGTAGAAGATTATGGATGTTTCCAAGATTTGCTGGTGACTGCGCCAGCGGTAACAAGAAGTCTCCTTCGGGAACAACTTCAGAGAAGAAGTGCGATATCAATGATTCTTGCTCCCAGATGATCCTTCGGCTTCATGATGTCTATGATTCAAATAAGATAAATGTCAAGATTCAAACTGTACCTGGATCTCCTTGTGGAGGAGTAGCTGCAGAGGCCAAGAAAGTCCAGGCCAGTTGGGTTGTCTTGGACAAAGATCTCAAACATGAGGAAAAACGCTGCATGGAAGAATTGCAATGCAACATTGTTGCTATGAAGCGATCTCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCGCAAAAGAAGGATCCTGAAGCCAGTCCATTACCTTCTGAGAAAGAAATGCCCGGAAAACAAGCCAAACAGAAGAGCGAATCTTTAAACTCCATAAAAGCACCTGTTGTCACCCCAACAAGCAGCCCGGAGCAAGAGACACCATTTACTGCAACTGAAGCTGGCACCTCATCAGTTTCAAGCTCAGACCCTGGAACTTCACCATTTTTTGTCTCAGAGATAAATGGTGAATTAAAGAAAGAGGAGACAATTAAGGAAAATGAAGAACTTGATGATACTAATTCGGACACAGACAGTGAAAATATGTCCACATCCTCAGCGAGCTTGAGATTCCAGCCTTGGATCTCAGAAATGCTTCTGCATCAACGATCATCTCAATGTGCAGATGAAAGATCTGAGAGATCTCATAAGAAGCCTCAAACATCTACAACCAGAGCCTTGCTTGAAAAGCTCTCCAGGCTTGAGAGAGATTCTGGATTTGAAATTTCGACCTCTAGAAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCAATAGCATTATCTAGAAATGCTCCTCCTGGTCCACCTCCATTATGCTCAATATGTCAACATAAAGCACCGGTTTTTGGAAAACCTCCAAGGTGGTTTAGCTATGCTGAGTTAGAGCTTGCTACTGGGGGATTTTCACAAGCCAACTTCTTGGCCGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCGGATGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCAAGTTCTCAGGGTGATCATGAGTTTTGCTCAGAGGTAGAAGTCTTAAGCTGTGCCCAGCATCGAAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTAGATTCTCATTTATATGGGAGACAACGGGATGTATTAGAGTGGTCTGCACGGCAAAAAATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAATGCAGAGTGGGTTGCATTATCCACCGGGACATGCGCCCAAATAATATTCTCATCACCCATGATTTTGAACCATTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGAAGTGGAAACTAGAGTCATTGGAACGTTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTTGGAGTGGTATTAGTGGAGCTTGTTACTGGGCGGAAAGCTGTGGATCTGAATCGACCTAAAGGGCAGCAGTGTCTTACTGAATGGGCGCGACCCCTGTTAGAGGAATATGCCATTGAGGAACTGATTGATCCGAGGCTGGGAAATTGCTATTCGGAAAATGAGGTCTATTGCATGCTGCATGCTGCCTCATTATGCATACGGCGAGATCCTCATTCAAGACCTCGCATGTCACAGGTTCTGCGAATGCTCGAGGGTGACATGGTCATGGAGGCAAATTACCTAACAAGTGCTGGTTATGATGCCGGGAACCGGAGTGGTCGGATCTGGGCAGAGCAGCAGATGCAGCATCATTACAGTGGTCCCCTGCTGGATGAGCCCCTGGAATCTTCATTCAGTGGAAAGCTTTCTCTGGAGAAATACAGGTCTGCTTACCGGGAAAGGGACAAAGCCTAG 2214 0.4508 MNREQKRGKQEKDSDGAEKVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPPQSSGRRLWMFPRFAGDCASGNKKSPSGTTSEKKCDINDSCSQMILRLHDVYDSNKINVKIQTVPGSPCGGVAAEAKKVQASWVVLDKDLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDPEASPLPSEKEMPGKQAKQKSESLNSIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSEINGELKKEETIKENEELDDTNSDTDSENMSTSSASLRFQPWISEMLLHQRSSQCADERSERSHKKPQTSTTRALLEKLSRLERDSGFEISTSRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDVLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGNCYSENEVYCMLHAASLCIRRDPHSRPRMSQVLRMLEGDMVMEANYLTSAGYDAGNRSGRIWAEQQMQHHYSGPLLDEPLESSFSGKLSLEKYRSAYRERDKA 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2244g00011 737 ProSiteProfiles Protein kinase domain profile. 400 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2244g00011 737 PANTHER OS01G0750732 PROTEIN 155 678 - -
Pral2244g00011 737 MobiDBLite consensus disorder prediction 300 323 - -
Pral2244g00011 737 ProSitePatterns Tyrosine protein kinases specific active-site signature. 521 533 IPR008266 GO:0004672|GO:0006468
Pral2244g00011 737 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Pral2244g00011 737 SUPERFAMILY Protein kinase-like (PK-like) 384 676 IPR011009 -
Pral2244g00011 737 Pfam Protein kinase domain 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2244g00011 737 MobiDBLite consensus disorder prediction 201 247 - -
Pral2244g00011 737 Gene3D Transferase(Phosphotransferase) domain 1 476 683 - -
Pral2244g00011 737 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 372 475 - -
Pral2244g00011 737 MobiDBLite consensus disorder prediction 175 283 - -
Pral2244g00011 737 FunFam Dual-specific kinase DSK1-like 11 165 - -
Pral2244g00011 737 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 476 679 - -
Pral2244g00011 737 CDD STKc_IRAK 406 672 - -
Pral2244g00011 737 MobiDBLite consensus disorder prediction 302 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2244g00011 Pral-Chr2244 119082 124171 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2244g00011 380 728 Trihelix Transcription Factor Family AT1G70460 48.747 3.50e-105 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral2244g00011 Pkinase 7.9e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2244g00011 - - gmx:100783226 1246.49