Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2242g00001 ATGGAATATCTGTGGACCGAGAGTAGGCAGGAAACTGGTGCCTCTGAATTACTTTTACGGACGCATGAAGACTCCCTTAGTGATGATATATCTGGGGGTTTCTGGTTGCCAATCAACCAACGGCCAACAGAAAATGTTGATCTGGATAATGTGGAGCAAGCATCATTAGACACTCAGCTAACATCATCAAATATCGGATTCAAGCTTCTCCAAAAGATGGGATGGAAAGGAAAGGGTCTTGGAAAGGATGAGCAAGGAATTACTGAACCAATAAAATCTGGGATAAGAGATCCAAAATTGGGAATAGGCAAACAAGAAGACGACTTTTTCACTGAAGAAGAAAATATCCAGCGAAAGAAACTTGATGTCGAGCTAGAGGAGACACAGGAAAATGTGAGGAAGCGGGAGGTGTTAGCAGAACAGGAGCAAAAAATTCAAGCTGGGGTTAAAGTGATACCAAAACTTTGTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCAATGGTATTTGAAGCTCACCTGAGCTCATATGATCACAATCACAGAAAGAGCTTCAAACAAATGAAGGAAATGCATGGTGACAGTAGTCGGGATGAGAGGCAAAAGCGAGAAAAACAACGTCAAGAGAGAGAAATGGCTAAGTTCGCTCAAAGTGCTGATGCGCAGAAGCAACAACAGATTCAACAGCAAACGGAGAATCGCCCTGCTTCGGTTTCCTCTGAATCTAGAACTGCTACCGCGCATGCTGATCAGGACCAGCGGAAGACTTTGAAGATTGGGTTTGCTTCGAAAGGCAGTGCTTCCAAGAACTCATCTGAGGGATCTGCAAAGAAGCAAGAAGTTGCCATGTCTTCTATATTTAGCTGTGATAGCGACGAAGAGTAG 888 0.4324 MEYLWTESRQETGASELLLRTHEDSLSDDISGGFWLPINQRPTENVDLDNVEQASLDTQLTSSNIGFKLLQKMGWKGKGLGKDEQGITEPIKSGIRDPKLGIGKQEDDFFTEEENIQRKKLDVELEETQENVRKREVLAEQEQKIQAGVKVIPKLCYCDLCNKQYKLAMVFEAHLSSYDHNHRKSFKQMKEMHGDSSRDERQKREKQRQEREMAKFAQSADAQKQQQIQQQTENLXPASVSSESRTATAHADQDQRKTLKIGFASKGSASKNSSEGSAKKQEVAMSSIFSCDSDEE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2242g00001 296 Coils Coil 111 131 - -
Pral2242g00001 296 MobiDBLite consensus disorder prediction 219 248 - -
Pral2242g00001 296 MobiDBLite consensus disorder prediction 265 288 - -
Pral2242g00001 296 ProSiteProfiles G-patch domain profile. 62 107 IPR000467 GO:0003676
Pral2242g00001 296 MobiDBLite consensus disorder prediction 184 296 - -
Pral2242g00001 296 Coils Coil 206 226 - -
Pral2242g00001 296 SMART G-patch_5 60 105 IPR000467 GO:0003676
Pral2242g00001 296 Pfam Zinc-finger double-stranded RNA-binding 157 183 IPR022755 -
Pral2242g00001 296 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 17 296 - -
Pral2242g00001 296 Pfam G-patch domain 63 103 IPR000467 GO:0003676
Pral2242g00001 296 MobiDBLite consensus disorder prediction 184 217 - -
Pral2242g00001 296 ProSitePatterns Zinc finger C2H2 type domain signature. 156 180 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2242g00001 Pral-Chr2242 11338 13472 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2242g00001 22 296 C2H2 Transcription Factor Family AT5G26610 61.372 5.86e-106 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2242g00001 - - gmx:100793206 387.497