Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2236g00001 ATGAATCATCCTTTTCTAGCAGCAGCTGAAAGCTCAGCAACTACCACCAAGATGATGCCTTTGAGAGAACAAGTCTCTAAAACAGAGAACCCACATAATCAAAATATGAGCCTCCCCATCTCGGAGCTCTCTGGGGACTCAGAGGAACACTTGGCTCAAATGATCACCAGCTTTGCCCAGACTCTGTTGCACAGCAAAATGCGTTGTCTGGGCTATCCCGCAAATCTCGAGTTTAACTATAAAGCATTGGCACCGTTGCTGCATTTTCACATCAACAATGCTGGCGATCCATTTGTGGGAAACTGCTTCACTCTCAATTCGGCAGCTTTTGAGGTTTGTGTTCTTGACTGGTTCGCTAGCTTGTGGGGGATTGACAAGAACCGGTACTGGGGATACGTTACCACCGGGGGAACTGAAGGCAATCTTCACGGGATTTTAATCGGGAGGGAACAATTGCCGGATGGGATTCTATATACGTCAGAAGAATCACATTATTCGCTGTCGAAGACAGCAAGAATGTACAGAATGCCATGTGTGAAGGTAGCCACACTGAGATCTGGTGAGATTGATTGTTCTGATCTCAAAGCTTCACTTCTTGCTCACAAGGACAAGCCTGCCATCATCAGCCTCAATATAGGAACAACTATGAAGGGAGCTATTGATGATGTGGATCTTGTGGTACAAACACTCGAAGAATGTGGTTTTACTCGTGAACGCTTCTATATCCATTGCGATGGAGCTTTGTTTGGACTCATGCTTCCTTTCATTAAAAAAGCACCGAAGCTTAGTTTCAAGAAACCCATTGGCAGCATATCTACTTCGGGGCACAAGTTTATAGGATGTCCCGTCCCTTGTGGAGTTATAATAACTCGTTTGGAATACATTGATGCCATGTCCAGTGATATTGAGATCATAGCTTCAAGGGACGCCACAATCACAGGAAGCAGGAGCGGCCACGCTCCGATCTTCCTCTGGTACGCTCTGAAGAAGAAAGGCTTATTAGGCCTCAAGAAGGAAGTGGAGCAGTGTATGAGAAATGCAGATTACCTGCGAGACAAGCTACGGGAGGCAGGAATCGGTGCGATGAAAAACGAGTTTAGCAACATCGTAGTGTTTGAGAAGCCTGAAGATGATGAATTCGCTCGCAGGTGGAGTCTGGCTTGCAACGGAACAATGGCGCATGTGGTGGTGATGCAGCACGTGACTGTTGAAATGTTGGACTCCTTTGTCTCTGAGTTCCTTCAATTCCCATCCTTTAAGCACCAAAATGGACACAAGAATCAGCCATACATCCCTGTTAATCGCCGATGA 1311 0.4622 MNHPFLAAAESSATTTKMMPLREQVSKTENPHNQNMSLPISELSGDSEEHLAQMITSFAQTLLHSKMRCLGYPANLEFNYKALAPLLHFHINNAGDPFVGNCFTLNSAAFEVCVLDWFASLWGIDKNRYWGYVTTGGTEGNLHGILIGREQLPDGILYTSEESHYSLSKTARMYRMPCVKVATLRSGEIDCSDLKASLLAHKDKPAIISLNIGTTMKGAIDDVDLVVQTLEECGFTRERFYIHCDGALFGLMLPFIKKAPKLSFKKPIGSISTSGHKFIGCPVPCGVIITRLEYIDAMSSDIEIIASRDATITGSRSGHAPIFLWYALKKKGLLGLKKEVEQCMRNADYLRDKLREAGIGAMKNEFSNIVVFEKPEDDEFARRWSLACNGTMAHVVVMQHVTVEMLDSFVSEFLQFPSFKHQNGHKNQPYIPVNRR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2236g00001 436 Gene3D Aspartate Aminotransferase, domain 1 329 416 IPR015422 GO:0003824
Pral2236g00001 436 Pfam Pyridoxal-dependent decarboxylase conserved domain 38 358 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral2236g00001 436 MobiDBLite consensus disorder prediction 1 20 - -
Pral2236g00001 436 Gene3D - 98 328 IPR015421 GO:0003824
Pral2236g00001 436 PANTHER - 19 430 - -
Pral2236g00001 436 SUPERFAMILY PLP-dependent transferases 54 414 IPR015424 -
Pral2236g00001 436 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 270 291 IPR021115 GO:0016831
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2236g00001 Pral-Chr2236 292 3143 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2236g00001 167 358 Calmodulin-binding Proteins AT2G02000 25.871 4.61e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2236g00001 K25193 - gmx:100781665 584.334