Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2235g00003 ATGTGTAAAACCAAAATGGCCGTCGACGCTTCCTCCCCTCGAAAACCCCGCACTTCGAAATCAGGAATCCCATCATCTTCCCGTCCCACCTTACCCGCCCCCGCCGCCTCTTCTTCCTACGAACCCTCCACTTCTTACCCCAGCACTGCCCCTTACTCTGCCTCCTCCGGTTTCAAACTCACCTCCGACACCTCCATTTCCAGCGGAACCTCTCTCGCTAGTTTTCGAGGCAGCCTCCCTGAAAACCCCCACATCTATGACTTCTCTGAAATTCGCTCCGCCACCAACAATTTCCTTGCCAAGCGTTATTCCTCCTCCTCCTCCACTCCCTCTTGGCGATGTGTTCTCAGAGGCAGAGACGTCATTGTTTTCCAGCGCAAGTTCCGTCGCAAGCTCCAGACGAATCAACTCAGAGATCGCCTCTCTGTGATCTGCCGTAGCCACCACGTCAGCATCATCAAGCTCGTCGGTGCTTGCATCTCCGGCGAACACATCTACCTCGTGTACGACTTCGTGAATGGAGCTAATCTCTCCGATTGTCTGCGAAATACGAAGAACGTTAACTTCACGGTCCTGTCGAGTTGGATTTCCAGAATGCAGGTTGCTACGGATCTCGCCGAAGGACTTGATTACATTCACAATAAAACCGGCTTAACCCTAAGCTTGGTGCACAACCACATCAAGAGCAGTGCGATAATCGTGACAGAACTTTCGTTCAACGCCAGGATTTCACACTTCGGCGCCTCACAGCTGTGCGGTGAGATCGACGAAGAGAGCGAAAATGCGAAAGAGATGGAAGAGATTACAGAGGAGCCATCTACCTCCCCATCTTCCACGAAATCAAAGGACCTGAGACGATCGAGAAGCTCTAACAAGAAATTCGAGGGCGTAAAAGGGTACATGGCGCCGGAATACAAATCCACTGGCGTGGCGACCCAGAAGTCCGATGTATACGCTTTTGGGGTAGTCATCTTGGAGTTGCTATCCGGAGACGAACCGTTGAAGTTCAAATACGATAAGAAAACCGGGGAGTTCGTGAGCAACTCGGTGATCGATAAGGCGAGGGCCGTTCTGGACGGTGATCCCGCCGGGGGCGGCGGCGTGGAAGGGAGGCTGAGGAGATGGATAGACCGGAGGCTGAGGGACTCGTTCCCGGTCGAGGTGGCAGAGGAGGTGACGCGTGTAGCGCTTGAGTGCGTACACGTGGATCCAGATAAGAGACCCAATATGGGACGCGTCGCTGGAAAAATCTCGAGGCTATATCTGAAGTCTAAGATCTGGTCCGATAACGTGAAGACGCCCACTGATATTCTGTCAGCCTCATTCGCTCCTCGATGA 1338 0.5321 MCKTKMAVDASSPRKPRTSKSGIPSSSRPTLPAPAASSSYEPSTSYPSTAPYSASSGFKLTSDTSISSGTSLASFRGSLPENPHIYDFSEIRSATNNFLAKRYSSSSSTPSWRCVLRGRDVIVFQRKFRRKLQTNQLRDRLSVICRSHHVSIIKLVGACISGEHIYLVYDFVNGANLSDCLRNTKNVNFTVLSSWISRMQVATDLAEGLDYIHNKTGLTLSLVHNHIKSSAIIVTELSFNARISHFGASQLCGEIDEESENAKEMEEITEEPSTSPSSTKSKDLRRSRSSNKKFEGVKGYMAPEYKSTGVATQKSDVYAFGVVILELLSGDEPLKFKYDKKTGEFVSNSVIDKARAVLDGDPAGGGGVEGRLRRWIDRRLRDSFPVEVAEEVTRVALECVHVDPDKRPNMGRVAGKISRLYLKSKIWSDNVKTPTDILSASFAPR 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2235g00003 445 MobiDBLite consensus disorder prediction 1 46 - -
Pral2235g00003 445 Gene3D Transferase(Phosphotransferase) domain 1 173 436 - -
Pral2235g00003 445 Coils Coil 248 268 - -
Pral2235g00003 445 ProSiteProfiles Protein kinase domain profile. 60 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2235g00003 445 PANTHER OS09G0572100 PROTEIN 1 445 - -
Pral2235g00003 445 MobiDBLite consensus disorder prediction 259 292 - -
Pral2235g00003 445 SUPERFAMILY Protein kinase-like (PK-like) 114 416 IPR011009 -
Pral2235g00003 445 Gene3D Phosphorylase Kinase; domain 1 59 171 - -
Pral2235g00003 445 MobiDBLite consensus disorder prediction 14 46 - -
Pral2235g00003 445 Pfam Protein kinase domain 129 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2235g00003 Pral-Chr2235 12235 14400 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2235g00003 81 445 Receptor kinase-like Gene Family AT1G51940 30.055 2.07e-39 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral2235g00003 Pkinase 6.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2235g00003 - - qsa:O6P43_028397 544.658