Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2235g00002 ATGAACAACATAATCAGGAGGGTTGCTTTGGCTTTCATTGTTGCATTAAGCTGCTATTCGGAACAAGTTTCATGTCAGAACAACAATAAAAGCCAAGCTGCAGTTCAGCTCGTAGCCCAGGCCGTTTACGGAAGCATGTCTAGTTTCACGGGCGTCTTCAAGGACGAAATAAAAAAGAATTTGGGTTTTTGCATAGTTGATGTAGATGCTGATTGGGACGGGGCATTTAATTTCACAAACGATCTGACATTTTTGACCTCATGTTCCCAGTCTCTAAAAGGAGATATTTCACAGCGCATATGCACAGCAGCAGAAATCAAACTATATGCCAGTGGTTTTGACATAAAGTCGAAGGGCCAGTCTAACAACTTGCAGCCCAACAAGAACTGTAACTTGAGCGTTTGGCTTAATGGGTGCGAACCTGGATGGGGCTGTAGTGCTGCTGAGAAAGTTCAACTTAATAATACTAAGGACATCCCTGTCAGGTCCACTGATTGTCAGCCTTGTTGTCCGGGTTTCTTTTGCCCTCGCGGCATTACTTGCATGATACCTTGCCCTTTAGGTGCTTACTGTCCACGTGGGCAGCTCAATCAAGCTACTGGAATATGTGAACCTTATCATTATCAGCTACCTGCTGGAAAGAAAAACCACAGTTGTGGGGGAGCAGATGTTTGGGCAGACATTTCAACCAGTTGGGATGTTTTTTGTTCCGCCGGATCTTACTGTCCGTCCTCCATCCAAAAAAATCCTTGCACGCAGGGACATTATTGCAGGACGGGCTCAACCGATGAAGAAAGTTGCTTCAAATTGGCGAGTTGTAAGCCTCAATCGGCTAATCAAAATATAACTGCATATGGTGTCATGGTTTTTGCTGGGTTGAGCTTCTTGCTTATCATCATATATAATTGTTCTGACCAAGTTCTTGCAACCCGAGAAAGAAGAATAGCAAAATCAAGAGAAAGGGCTGCTGCAAGTGTAAGAGAAACACAAGCACGTGAAAAATGGAAATCGGCGAAAGATATTGCTAAGAAGCATGCAGTAGGACTGCAAACTTCTTTATCACGTACGTTTTCTCGTAGAAAATCTATGAAGGGGGATCTGAAAGCTTTTGGTTCTAAATCTGCGTCAGAAACTCCCTTGCCACCTGCGCCACCAGCAAGTGCTGGTACATCATCGAAAGGAAACAAAAAAGATAAAAACAGCCTCACAAAAATGATCCAGAAAATTGAGGAAGACCCTGATAGTCAGGAAGGCTTTAATGTTGAGATAGGAGATAAAAATATCAAAAAGCAAGCACCCAAAGGCAAGCAGTTGCATACGCAAAGCCAAATTTTTAAGTATGCGTATGGTCAGATTGAAAAAGAAAAGGCTTTACAGGAACAAAATAAGAACCTTACCTTCTCTGGAGTTATTTCAATGGCTAGTGATATTGAGATCCGGAAGAGGCCTACGATTCAGGTTGCTTTCAAAGACTTAACTCTCACTTTGAATGCGAAAAACAAGCATCTTCTAAGATGTGTGACTGGGGAACTACATCCTGGTCGAGTTTCAGCAGTCATGGGCCCATCTGGGGCTGGTAAAACAACATTTCTTTCTGCTTTAACTGGAAAAGCAACCGGATGTCATACAACTGGCTTAGTTCTTATAAATGGCAAGGTTGAATCTATTCGGTCATACAAGAAGATCATTGGGTTTGTGCCACAAGATGATATTGTGCATGGCAATTTGACAGTAGAAGAGAATCTGTGGTTCAGTGCCAGATGCAGACTTTCAGCTGATTTACCAAAAGCAGAGAAGGTTCTAGTCGTTGAGAGAGTTATTGAGTCATTAGGTCTGCAAGCAATCCGAGATTCTCTGGTTGGAACGGTGGAGAGGCGTGGAATCTCTGGAGGTCAAAGAAAACGAGTGAATGTAGGGCTGGAAATGGTTATGGAACCTTCACTCCTGATTCTAGATGAACCAACATCTGGTTTAGATAGTTCATCTTCTCAGTTATTGCTTCGAGCACTAAGGCGAGAGGCTCTAGAGGGTGTTAATATATGCATGGTCCTTCACCAACCAAGTTACACACTGTTCAAGATGTTTGATGATTTTATACTACTCGCTAAAGGTGGTCTTATAGTGTATCATGGACCAGTGAAGAAAGTTGAAGAGTATTTTTCCAGCTTGGGGATTGTTGTTCCTGATCGCGTTAATCCTCCAGATTATTACATAGACATTTTAGAAGGGATAGTAAAACCAAGCTCAAGCACAGCAGTAAACTATAAACAACTACCTGTTAGATGGATGCTTCATAATGGGTATCCTGTTCCTTTGGACCTGCTTCAGGGTGTCGAAGGGATGGAAGGCACAAGTGGTGAAAGTTCCACACATGGGGCAGCTACTCCAGCAGCAGAAGCCGAAGATCCGTCTTTAGCTGGGGAAATTTGGCAGGATGTAAAAGTCAATGTTGAGAAGCAGAAAGACTTCTTTCGATATACTTTCTTTACTTCAAATGATTTATCTAATCGGGTAACCCCTGGAGTCTTCCAACAATACAGATACTTTCTTGGAAGGTCTGGTAAGCAGCGGCTACGAGAGGCTAGAACACAGGCCGTAGATTTTCTAATTTTGTTACTTGCTGGAATATGCTTAGGAACACTTGCCAAAGTGAGTGATGAAACATTTGGAGCAACTGGTTACACATATACTGTCATAGCAGTATCACTCCTTTGCAAGATCGCGGCTTTGAGAACATTTTCACTGGATAAGTTGCACTACTGGAGAGAGAGTGCATCTGGCATGAGTAGCCTGGCTTACTTTCTTGCAAAGGATACAGTTGATCATTTTAATACACTCATAAAGCCGGTGGTCTATCTCTCAATGTTCTATTTCTTCAACAATCCTAGATCCTCTGTCGTAGATAACTACTTTGTTTTGCTGTGCTTGGTGTACTGTGTCACTGGCATAGCTTATATATTGGCGATCTCACTTGAACCTGGTCCTGCCCAATTGTGGTCGGTGTTACTTCCAGTAGTTTTGACACTTGTAGCAACCAGTGATAGTGTAGCTGAGAGCTCATTTATGGGCAAGGTAGCTGACGTTTGCTACGCAAAGTGGGCTCTTGAAGCATTTGTGATATCAAACGCTAAAAGATATGCTGGGGTTTGGTTAATAACCCGATGCGGTGCACTAAATCTCCGTGGCTATGATCTCAACAACTGGTATCAATGTCTCATTTTTCTTGTGGTAACGGGAGTACTTAGTCGCATTGTGGCATTCTTTTGTATGATCACTCTCCAGAAGAAATGA 3291 0.4263 MNNIIRRVALAFIVALSCYSEQVSCQNNNKSQAAVQLVAQAVYGSMSSFTGVFKDEIKKNLGFCIVDVDADWDGAFNFTNDLTFLTSCSQSLKGDISQRICTAAEIKLYASGFDIKSKGQSNNLQPNKNCNLSVWLNGCEPGWGCSAAEKVQLNNTKDIPVRSTDCQPCCPGFFCPRGITCMIPCPLGAYCPRGQLNQATGICEPYHYQLPAGKKNHSCGGADVWADISTSWDVFCSAGSYCPSSIQKNPCTQGHYCRTGSTDEESCFKLASCKPQSANQNITAYGVMVFAGLSFLLIIIYNCSDQVLATRERRIAKSRERAAASVRETQAREKWKSAKDIAKKHAVGLQTSLSRTFSRRKSMKGDLKAFGSKSASETPLPPAPPASAGTSSKGNKKDKNSLTKMIQKIEEDPDSQEGFNVEIGDKNIKKQAPKGKQLHTQSQIFKYAYGQIEKEKALQEQNKNLTFSGVISMASDIEIRKRPTIQVAFKDLTLTLNAKNKHLLRCVTGELHPGRVSAVMGPSGAGKTTFLSALTGKATGCHTTGLVLINGKVESIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLSADLPKAEKVLVVERVIESLGLQAIRDSLVGTVERRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFKMFDDFILLAKGGLIVYHGPVKKVEEYFSSLGIVVPDRVNPPDYYIDILEGIVKPSSSTAVNYKQLPVRWMLHNGYPVPLDLLQGVEGMEGTSGESSTHGAATPAAEAEDPSLAGEIWQDVKVNVEKQKDFFRYTFFTSNDLSNRVTPGVFQQYRYFLGRSGKQRLREARTQAVDFLILLLAGICLGTLAKVSDETFGATGYTYTVIAVSLLCKIAALRTFSLDKLHYWRESASGMSSLAYFLAKDTVDHFNTLIKPVVYLSMFYFFNNPRSSVVDNYFVLLCLVYCVTGIAYILAISLEPGPAQLWSVLLPVVLTLVATSDSVAESSFMGKVADVCYAKWALEAFVISNAKRYAGVWLITRCGALNLRGYDLNNWYQCLIFLVVTGVLSRIVAFFCMITLQKK 1096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2235g00002 1096 MobiDBLite consensus disorder prediction 358 401 - -
Pral2235g00002 1096 MobiDBLite consensus disorder prediction 781 802 - -
Pral2235g00002 1096 FunFam ABC transporter G family member 24 481 723 - -
Pral2235g00002 1096 CDD ABCG_EPDR 485 711 - -
Pral2235g00002 1096 MobiDBLite consensus disorder prediction 319 340 - -
Pral2235g00002 1096 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 238 1084 - -
Pral2235g00002 1096 Gene3D - 476 724 IPR027417 -
Pral2235g00002 1096 ProSitePatterns ABC transporters family signature. 628 642 IPR017871 GO:0005524|GO:0016887
Pral2235g00002 1096 Pfam ABC transporter 507 656 IPR003439 GO:0005524
Pral2235g00002 1096 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 487 729 IPR003439 GO:0005524
Pral2235g00002 1096 SMART AAA_5 513 714 IPR003593 GO:0016887
Pral2235g00002 1096 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 488 725 IPR027417 -
Pral2235g00002 1096 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Pral2235g00002 1096 Pfam ABC-2 type transporter 685 1096 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2235g00002 Pral-Chr2235 5204 11234 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2235g00002 514 717 Calmodulin-binding Proteins AT2G36910 27.803 9.19e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2235g00002 - - gmx:100794093 1694.86