Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pral2234g00012 | ATGAGATTCTTCTTTGAAGATGTTAGCTTCCCCCAGGGATCTGAAGTTGATAATGTTTTTCTACAAGAGGCAGAGAACTCCCTCAGAAAATCATTTCTTTTGGCTGACTTAGCTTTGGCTGATGATTGCAGTGTGAGCAACTCATCAGGGACCACGGCTCTTACTGCCTTCATATTTGGAAGGCTTCTAATGGTGGCCAATGCTGGCGATTGCCGAGCAGTTCTCTGTCGTAAAGGAAAGGCAATTGACATGTCTCAAGATCACAGGCCTATTTATCCTTCAGAGCGGAGGCGGGTTGAGGAATTAGGCGGTCGTGTAGATGATGGTTATCTTAATGGGGTTTTGTCAGTTTCTCGAGCCCTTGGGGACTGGGATATGAAGTTTCCTCGTGGTTCTCCCTCGCCTTTGATTGCGGAGCCTGAGTTTCGTCAAGTGGTTCTGACAGAGGATGATGAGTTCCTCATCATAGGTTGTGATGGAATTTGGGATGTCATGACAAGTCAGCAGGCAGTCAACCTTGTTCGTAGAAGCCTGAGGAGGCATTATGACCCAGAGCGCTGTGCCAGGGACCTGGTCATGGAGGCACTACGCCTTAATACGTTTGATAATCTCACAGTGATTGTTGTGTGCTTCTCTTCTAATTCTATTGATCCCAGGGAGCCATCCCCTCCTCGTCAGAGGAAATTGAGGTGCTTTAGCCTTTCTGCAGAGGCGCTTTGTAGCTTGAAGAACTTGTTGGAAGGCAGTGCAAGTAATTGA | 759 | 0.4743 | MRFFFEDVSFPQGSEVDNVFLQEAENSLRKSFLLADLALADDCSVSNSSGTTALTAFIFGRLLMVANAGDCRAVLCRKGKAIDMSQDHRPIYPSERRRVEELGGRVDDGYLNGVLSVSRALGDWDMKFPRGSPSPLIAEPEFRQVVLTEDDEFLIIGCDGIWDVMTSQQAVNLVRRSLRRHYDPERCARDLVMEALRLNTFDNLTVIVVCFSSNSIDPREPSPPRQRKLRCFSLSAEALCSLKNLLEGSASN | 252 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pral2234g00012 | 252 | Gene3D | - | 2 | 217 | IPR036457 | - | |
| Pral2234g00012 | 252 | Pfam | Protein phosphatase 2C | 23 | 203 | IPR001932 | - | |
| Pral2234g00012 | 252 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 211 | IPR001932 | - | |
| Pral2234g00012 | 252 | PANTHER | PROTEIN PHOSPHATASE 2C | 26 | 209 | IPR015655 | GO:0004722|GO:0006470 | |
| Pral2234g00012 | 252 | SMART | PP2C_4 | 1 | 209 | IPR001932 | - | |
| Pral2234g00012 | 252 | SUPERFAMILY | PP2C-like | 20 | 212 | IPR036457 | - | |
| Pral2234g00012 | 252 | CDD | PP2Cc | 12 | 211 | IPR001932 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pral2234g00012 | Pral-Chr2234 | 69018 | 70400 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pral2234g00012 | 1 | 248 | PP2C-type Phosphatase Gene Family | AT3G62260 | 68.675 | 1.76e-122 | 348 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pral2234g00012 | K14803 | - | pop:7455402 | 420.624 |