Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2234g00002 ATGAGCGGAAAAGTACTCGTCTCCGCAGTTTCCCTGATCCTCGTGGTGGGGGTTGCCATCGGCACCGTGGTGGTGGTTCACAAGCAGAATGGTGACTCTGGTCAGATCTCTTCCCATCAGAATGCGGTGGCGCAAATGTGCCAGAACACCGACGACCCGAAGTTTTGCCAACAAGTTCTCGGCCATGTGAACGACACCTCTGACCCAAAGGCGTTCCTAACGGCGGTAGTGGAAGCAACCACCAACAGCGTCATCAAGGCCTTCAATATGAGCGACAGGCTCAGTGTGGATCATGGCAATGGCGAGAAAGGCCTTAAGATGGCCCTTGATGACTGCAAGGACTTGCTCCAGTTCGCCATGGACAGTCTTCAATCGTCTACCGACTTGTTGCGTAACGATATCAAAACTGTGACCGACCAAACCCCTGACTTCAGGAACTGGCTTTCCGCCGTCATCTCCTACCAGCAGGCCTGCATGGATGGCTTTGACGATAACAACGACGGCGAGAAGCAGGTCAAGTCACAGTTGCAAGAGCAGGCATTAGACGGCGTGGGGAAGATCACTGGTATAGCCCTTGACATTGTCGCTGATCTGGCCAAGATCCTCGACAAGTTTGGGTTGAAGTTGGACTTGAAACCTGCATCCCGCCGCCTTATGGAAGTGGACAGCGAAGGTTATCCTACCTGGTTCTCTGCTTCCGACCGTAAGCTCCTGCAGAAGATGCACAGGGGACACCATGTGAAACCCAATGTCGTGGTGGCTAAGGATGGCAGTGGAAACTTCAAGACCATTGCAGAGGCCATTGCCTCCTATCCCAAAAACGGTGCAAACGGCAGATACGTGATCTTCGTCAAGGCAGGCGTATACCAGGAGTACATCATCGTTCCCAAAAATGCAGTGAATATCCTTATGTATGGTGAGGGCGCAGGTAAAACTGTCATCACCGGAAACAAAAACTTTGTTGATGGGGTCAAGACAATGCAAACAGCTACCTTTGCCAACACTGCAAATGGGTTCATCGCCAAGTACATGTCATTTGTGAACAGCGCCGGACCTGAGAAGCACCAAGCAGTGGCACTGAGGAACCAAGGAGACATGTCGGCTTTCTTCGATTGCGCCATCGTGGGAAACCAAGACACCCTGTACGCTCAAACCAATCGTCAATTCTACAAGAACTGCGACATATCTGGTACTATTGACTTCATCTTTGGGGTGTCACCAACACTGATCCAGAGCTCTAGAATCATTCTAAGGAAGCCATTGGACAACCAATTCAACACAGTGACGGCGGACGGCACAGCCCAAAAGAACATGCCCACCGGAATTGTGATCCAAAACTGCGATATCGTGCCGGAGCCAGCTCTGTTCCCCCTCAGGTTCCAATTGAAGTCATACTTGGGAAGGCCATGGAAGGCTTACTCCAAGACAGTGGTGATGGAATCCAGAATCGGTGATGTTATTCATCCCGATGGATGGATTCCTTGGGAGGGAAGCATGTACCTCGACACCTTGTACTATGCTGAGTACAACAACGAAGGACCCGGTGCTAATGTTCAGGGAAGGGTCAAGTGGCCAGGTTACAAGGGCCTGATCAGCAAGAACGAAGCTCTCCAATTCACAGCAGGCCAATTCCTGCAAGGTGGACCCACCTCCAACACTGCGGTTTGGCTCAAGGCTCTTCACGTTCCTTATGACATTGGCCTCACCAAGCCTTGA 1716 0.5146 MSGKVLVSAVSLILVVGVAIGTVVVVHKQNGDSGQISSHQNAVAQMCQNTDDPKFCQQVLGHVNDTSDPKAFLTAVVEATTNSVIKAFNMSDRLSVDHGNGEKGLKMALDDCKDLLQFAMDSLQSSTDLLRNDIKTVTDQTPDFRNWLSAVISYQQACMDGFDDNNDGEKQVKSQLQEQALDGVGKITGIALDIVADLAKILDKFGLKLDLKPASRRLMEVDSEGYPTWFSASDRKLLQKMHRGHHVKPNVVVAKDGSGNFKTIAEAIASYPKNGANGRYVIFVKAGVYQEYIIVPKNAVNILMYGEGAGKTVITGNKNFVDGVKTMQTATFANTANGFIAKYMSFVNSAGPEKHQAVALRNQGDMSAFFDCAIVGNQDTLYAQTNRQFYKNCDISGTIDFIFGVSPTLIQSSRIILRKPLDNQFNTVTADGTAQKNMPTGIVIQNCDIVPEPALFPLRFQLKSYLGRPWKAYSKTVVMESRIGDVIHPDGWIPWEGSMYLDTLYYAEYNNEGPGANVQGRVKWPGYKGLISKNEALQFTAGQFLQGGPTSNTAVWLKALHVPYDIGLTKP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2234g00002 571 CDD PMEI-like_3 46 200 - -
Pral2234g00002 571 PANTHER PECTINESTERASE 18 558 - -
Pral2234g00002 571 SUPERFAMILY Pectin lyase-like 246 552 IPR011050 -
Pral2234g00002 571 Pfam Plant invertase/pectin methylesterase inhibitor 42 194 IPR006501 GO:0004857
Pral2234g00002 571 NCBIfam pectinesterase inhibitor domain 30 195 IPR006501 GO:0004857
Pral2234g00002 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 196 IPR035513 -
Pral2234g00002 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 200 IPR035513 -
Pral2234g00002 571 FunFam Pectinesterase 244 568 - -
Pral2234g00002 571 FunFam Pectinesterase 39 199 - -
Pral2234g00002 571 Gene3D - 244 568 IPR012334 -
Pral2234g00002 571 ProSitePatterns Pectinesterase signature 2. 395 404 IPR033131 -
Pral2234g00002 571 SMART PMEI_2 38 194 IPR006501 GO:0004857
Pral2234g00002 571 Pfam Pectinesterase 250 547 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2234g00002 Pral-Chr2234 23136 24951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2234g00002 1 568 Carbohydrate Esterase AT2G47030 38.944 1.84e-133 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2234g00002 K01051 - gmx:100775246 769.229