Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2234g00001 ATGAACGGAAAAGTGATCGTGCCCGCTGTTTCTATCATCCTCGTGGTGGGTGTGGCCCTTGGCGTCGTCGGCATCGTACACTATAGGAACAACAGCAGCAATGGTCAGCCAGAGACCAACACCCACACAAAGGCCGTTGCCGCCATATGCCAAAGCTCTGACGACCCCAAGCTCTGCCATAACACGCTCGACCCCGTCAACAGCACCGACCCTAAGGATTATATAAAGGCTGTGGTGGAATCCGCCATGAACACCGTCATCCAGTCCTTTAATCTGACCGACAGGGTTCAAATAGAGCACGGAAATAGCAGCACAAGAGGCATAAAGATGGCCGTCGAGGACTGCAAGGACTTGCTGCAATCAGCGATAGCGGAACTGCAAGCATCGGGTGTGCTGGTTCAAGACAACAATGCTCGAAGCGTGACCGACCGGGAAGATGACCTCAAGAACTGGTTGAGCGCCGTCATCGCCTACCAGCAATCCTGTCTTGATGGGTTTGAGACGGACAATGATGGCGAGAAGGCGATACAGCAACAATTGCAAGCAGGCGGCCTGGACAACGTGGAGAAGCTCACAGGGTTGGCACTAGATGTTGTGGCTGGCATTTCCCAGTTTCTCTCCGTCTTGGACTTGGACTTGGACGTAAAACCTGCTTCTCGTCGTCTTCTGAGCAACGTGGCGGAGTTAGATCACGACGGATATCCCACTTGGATCTCCGGCCCCGATCGCCAGCTCATCGAGCTGCCCAACACAGGACACCCTACCGATCAGCCCAACGCGGTGGTTGCCCAGGACGGCAGTGGCCAGTTCAAGACCATTCAAGAGGCCATCAATTCATACCCGCCGAACTTCCAAGGCAGATTCACCATCTACGTCAAGGCCGGCATCTACAATGAATACGTCCACATTACCAAGAAGCAGCCCAACATCCTCATGTACGGTGATGGCCCCAACAAGACCATTGTCACTGGCAACAGGAGCTACACCTCCGGTTGGAAAACAATCAAAACTGCCACCTTCACCACCTTGGGTGACGGCTTCATTGCCAAGTCGATGGCATTCGAGAACACCGCCGGAGCTGAAGGACATCAAGCAGTTGCGCTGAGGGTGATGGGTGATCGCTCAGCTTTCTTCGACTGTGCCATGCGCGGTTATCAAGACACCTTGTACGCACACGCCAAACGTCAGTTCTACCGCAACTGTGAGATCTCCGGCACTGTGGACTTCATCTTCGGATATGGCAGCACCTTGATCCAGAACTCCAGAATCTTGGTCAGGAAGCCCATGGATAACCAGCAGAACATCGTGGTCGCCGACGGCACTGCCCAAAAGCAAATGCGCACCGGAATTGTCCTCCAGAACTGCCAGATCATGGCCGACGCCAGCCTCCAAGCCGACCGGTTGACCGTCAAGTCCTACCTGGCCAGGCCATGGAAGGCATACTCCAGGGCTATCTTCATGGAAAGTGAAATCGGTGATCTCATCAACGCCGATGGTTATCTTCCATGGATGGGCAGCATGTTCCTAGACACCTGCTACTTCGCCGAGTATGCCAACACCGGTCCCGGTGCCGCCACAAACAACAGGGTCAAGTGGAGTCACGGCGTCATCACCAAGGATGATGCGACTCAATACACCGCCGAGCCTTGGCTTCAGGCCGGCTCATGGTTGCCCGCCACCGGTATTGCCTTCGACAGCGGTCTCACCAAAGCTTAA 1716 0.5478 MNGKVIVPAVSIILVVGVALGVVGIVHYRNNSSNGQPETNTHTKAVAAICQSSDDPKLCHNTLDPVNSTDPKDYIKAVVESAMNTVIQSFNLTDRVQIEHGNSSTRGIKMAVEDCKDLLQSAIAELQASGVLVQDNNARSVTDREDDLKNWLSAVIAYQQSCLDGFETDNDGEKAIQQQLQAGGLDNVEKLTGLALDVVAGISQFLSVLDLDLDVKPASRRLLSNVAELDHDGYPTWISGPDRQLIELPNTGHPTDQPNAVVAQDGSGQFKTIQEAINSYPPNFQGRFTIYVKAGIYNEYVHITKKQPNILMYGDGPNKTIVTGNRSYTSGWKTIKTATFTTLGDGFIAKSMAFENTAGAEGHQAVALRVMGDRSAFFDCAMRGYQDTLYAHAKRQFYRNCEISGTVDFIFGYGSTLIQNSRILVRKPMDNQQNIVVADGTAQKQMRTGIVLQNCQIMADASLQADRLTVKSYLARPWKAYSRAIFMESEIGDLINADGYLPWMGSMFLDTCYFAEYANTGPGAATNNRVKWSHGVITKDDATQYTAEPWLQAGSWLPATGIAFDSGLTKA 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2234g00001 571 Pfam Plant invertase/pectin methylesterase inhibitor 45 197 IPR006501 GO:0004857
Pral2234g00001 571 PANTHER PECTINESTERASE 18 558 - -
Pral2234g00001 571 Gene3D - 254 568 IPR012334 -
Pral2234g00001 571 SMART PMEI_2 41 198 IPR006501 GO:0004857
Pral2234g00001 571 FunFam Pectinesterase 42 203 - -
Pral2234g00001 571 Pfam Pectinesterase 259 552 IPR000070 GO:0030599|GO:0042545
Pral2234g00001 571 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 199 IPR035513 -
Pral2234g00001 571 NCBIfam pectinesterase inhibitor domain 33 171 IPR006501 GO:0004857
Pral2234g00001 571 ProSitePatterns Pectinesterase signature 2. 403 412 IPR033131 -
Pral2234g00001 571 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 202 IPR035513 -
Pral2234g00001 571 SUPERFAMILY Pectin lyase-like 257 566 IPR011050 -
Pral2234g00001 571 CDD PMEI-like_3 48 203 - -
Pral2234g00001 571 FunFam Pectinesterase 254 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2234g00001 Pral-Chr2234 18478 20423 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2234g00001 1 568 Carbohydrate Esterase AT2G47030 40.728 4.25e-141 419
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2234g00001 K01051 - gmx:100808559 723.005