Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2228g00005 ATGAAGGGAGTGGTGTCTGTGAGAGAAAGCAAGGCAAGGAAGCCCTACTCTCTGCATACCACAAGGTCATGGAGCTTCATGGATTTGAAGCAGCCTTTGAATAATCACAATCACGGCCTCTTATCCAGAGCTAACTATGGCCAAGATGTTATAGTTGGCATATTTGACACTGGAGTGTGGCCTGAATCAAAGAGCTTCAGCGATGAAGGCATGAAACCTGTTCCTGCCAGATGGAAAGGAATCTGCCAAAATGGAACTGCTTTCAACTCATCCACCTGTAATCGAAAGATAATCGGAGCTCGGTATTACCTCAATGGATATCAAGGCGCATTTGGTCCTCTAGACGAATCCCAAGACATCAAATCTGCTCGTGACAAAGACGGCCACGGCACTCACCTGGCCTCTATCATCGCCGGACGCACGGTTCCCAACGTCACAGGGTATGGCGGGTTCGCCGGCGGCACCGCGTCGGGTGGCGCCCCACTGGCCCGCCTTGCCATCTATAAGGTATGCTGGGTTTGGCCAGGCAGTTCTTATGAGTCAGGGAATTACTGCGACGACTTAGACATAACCAAGGCTTTCGACGATGCCATCGGAGACGGCGTCGACGTTATAAGCTTCTCCTTTGGTTTCGATGTTGCCCAGACTTTTGTACGCGACAAGAGCGCAATCGGATCGTTGCACGCATTGAAGAAGAACATCGTGGTGGTTTCTAGTGCTGGCAATACTGGACCTGATCATCAAACTTTGACCAACGTTGCTCCTTGGCTCATCACGGTCGGTGCTAGTCACATTGATCGTACGTTCCCTGCTCCTCTTCTTCTTGCCGATGGCACAAAAGTTCAGGGACAATCAATCACTCCAGTGCAAATGGACAACAACTTCCACAGCTTGGTGTTGGCGAGCGATGTTGAGAAACCAACGACTTCTAAAACAGATTCAGGGTATTGTCTGGACGGCAGCCTTGAGGCAGAGAAGGTGAAAGGGAAGATAGTGCTGTGTCTTAGGGGGAAAGGCACTCCATTACACCAAGGTCTGGAAGTTCGGAACAATGGTGGGGTTGGTTTCATTCTTGGGAATGATCCTGATCATGGCAATGATATTGCCTGTGAGTCCAACCAAATCCCATCCACTGGTGTTACTTTTGAAGATACCAAAAAACTTATCCATTACATAAGAACAACCAAGGACGCTAAGGCTCGTATTCTTCCTGGGCAAACAACCTTAAACTCTAAACCAGCACCCACCGTCACTTCCTTCTCTGGTAGGGGTCCAAATCCCATTGACCCCAACTTTATCAAGCCTGACATAATAGCTCCAGGAAGCCAGATATTGGGAGCGTGGACAGAAAAGGATGGGCCCACAAGGAACAGTAAGGGCGGTGATCGGAGAAAGACAGAGTACAATATAATGTCTGGAACTTCAGTGGCTACTCCTCACGTTGCTGCCGCGGCAGTTCTTCTCAAAGCCATTCACCCTACTTGGAGTGCGGCTGCTGTTAAATCTGCCCTCATGACCACTGCCTCCACGACAGACAACACAGGAAATCCTATGATGGATCAAAGTGGAAAACCTGCGACGCCATTGGCAATGGGATCGGGCCACCTACAACCCGTGAAAGCAGCAGATCCTGGACTGGTTTATAATAGCTCTTACGAGGATTACGTTCTTTATACTTGTGGCCTTGGACAAACACACGCCATGAATATGCCGTATAAATGTCCAGTTTCAGTGCCCGAACCAGTCAACCTCAACTATCCATCCATACAAATCCACAAGCTCAATGGAACCAAGACCTTTACCAGAAGAGTCACTAACGTCGGACGCAGCAATTCTACTTACACTTTTAATTCTGAGTCACCGAAGGAATATACAATCACTGCCTCTCCAGATGTTCTCAAGTTTGATCATGTTGGTCAGGAATTGAGCTTCAACATCACTATCACAGTTGTTAGTTGGAATTACCCCACCAAGTATGATCCAGATTTTTACTATTTTGGATCCTATACTTGGACTGATAAAGAGTTCGTTGTGAGAAGCCCTGTCGCTGTGTCTTTCCCATAA 2064 0.4806 MKGVVSVRESKARKPYSLHTTRSWSFMDLKQPLNNHNHGLLSRANYGQDVIVGIFDTGVWPESKSFSDEGMKPVPARWKGICQNGTAFNSSTCNRKIIGARYYLNGYQGAFGPLDESQDIKSARDKDGHGTHLASIIAGRTVPNVTGYGGFAGGTASGGAPLARLAIYKVCWVWPGSSYESGNYCDDLDITKAFDDAIGDGVDVISFSFGFDVAQTFVRDKSAIGSLHALKKNIVVVSSAGNTGPDHQTLTNVAPWLITVGASHIDRTFPAPLLLADGTKVQGQSITPVQMDNNFHSLVLASDVEKPTTSKTDSGYCLDGSLEAEKVKGKIVLCLRGKGTPLHQGLEVRNNGGVGFILGNDPDHGNDIACESNQIPSTGVTFEDTKKLIHYIRTTKDAKARILPGQTTLNSKPAPTVTSFSGRGPNPIDPNFIKPDIIAPGSQILGAWTEKDGPTRNSKGGDRRKTEYNIMSGTSVATPHVAAAAVLLKAIHPTWSAAAVKSALMTTASTTDNTGNPMMDQSGKPATPLAMGSGHLQPVKAADPGLVYNSSYEDYVLYTCGLGQTHAMNMPYKCPVSVPEPVNLNYPSIQIHKLNGTKTFTRRVTNVGRSNSTYTFNSESPKEYTITASPDVLKFDHVGQELSFNITITVVSWNYPTKYDPDFYYFGSYTWTDKEFVVRSPVAVSFP 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2228g00005 687 Pfam Subtilase family 47 520 IPR000209 GO:0006508|GO:0008236
Pral2228g00005 687 CDD Peptidases_S8_3 16 509 IPR034197 -
Pral2228g00005 687 Pfam Fibronectin type-III domain 583 684 IPR041469 -
Pral2228g00005 687 Gene3D - 266 409 - -
Pral2228g00005 687 PRINTS Subtilisin serine protease family (S8) signature 125 138 IPR015500 -
Pral2228g00005 687 PRINTS Subtilisin serine protease family (S8) signature 472 488 IPR015500 -
Pral2228g00005 687 PRINTS Subtilisin serine protease family (S8) signature 47 66 IPR015500 -
Pral2228g00005 687 Gene3D - 560 686 - -
Pral2228g00005 687 ProSitePatterns Serine proteases, subtilase family, serine active site. 473 483 IPR023828 -
Pral2228g00005 687 FunFam subtilisin-like protease SBT1.5 266 409 - -
Pral2228g00005 687 FunFam Subtilisin-like protease SBT1.5 49 282 - -
Pral2228g00005 687 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 684 IPR045051 -
Pral2228g00005 687 Pfam PA domain 312 388 IPR003137 -
Pral2228g00005 687 ProSiteProfiles Serine proteases, subtilase domain profile. 23 542 - -
Pral2228g00005 687 SUPERFAMILY Subtilisin-like 18 546 IPR036852 GO:0004252|GO:0006508
Pral2228g00005 687 CDD PA_subtilisin_like 273 402 - -
Pral2228g00005 687 Gene3D Peptidase S8/S53 domain 49 555 IPR036852 GO:0004252|GO:0006508
Pral2228g00005 687 MobiDBLite consensus disorder prediction 406 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2228g00005 Pral-Chr2228 34068 36824 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2228g00005 4 686 Subtilisin-like Serine Gene Family AT5G45650 49.003 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2228g00005 - - gmx:100793064 870.537