Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2227g00004 ATGGCGTCTGGTGGAGGGAGGCGTCATCATCGTAATCTTGTGCCTCTTGCTGCATTGATAAGCAGGGAGATGAAGAGTGAGAAGATGGAGAAGCCCACAGTGAGATATGGACATGCTGCACAGTCTAAGAAAGGGGAAGATTACTTTTTAATAAAGACTGATTGTCAGCGAATACCTGGAAGTTCTTCATCACCATTTTCTGTATATGCGATCTTTGATGGTCACAATGGAAATGCTGCAGCAATTTTTAGCAGAGAAAATTTGTTAAATCACATTTTGAGTGCCCTTCCTCAACGTATTGGAAGAGAGGAGTGGCTTCAGGCATTACCTAGGGCATTGGTTGCTGGGTTTGTGAAGACTGACAAGGAGTTTCAGAGCAGAGGAGAAACTTCTGGCACTACAGCAACATTTGTGATAGTTGATAGATGGACTGTGACGGTAGCATCTGTTGGAGATTCCCGTTGCATACTAGACGCCCAAGGTGGCCCTATTACTAACTTAACTGTTGATCACAGACTTGAAGAGAATATTGAAGAGAGAGAACGTATTACTGCAAGTGGAGGTGAAGTTGGAAGGCTTAGTATTTGCGGTGGTGCTGAGATTGGTCCTCTTCGTTGCTGGCCAGGGGGTCTGTGCCTTTCTCGGTCAATTGGAGATGTGGATGTAGGGGAGTTTATAGTTCCAATACCGTATGTCAAACAAGTGAAGCTGTCAAATGCTGGTGGGAGGCTTATAATTGCTTCTGATGGCATCTGGGATGCTCTATCCTCAGAAATGGCTGCAAAATCTTGTCGGGGTTTGCCTGCTGAACTTGCTGCTAGGCAGGTTGTGAAGGAAGCATTAAGGACAAGAGGTTTAAGGGACGATACAACTTGCATAGTAGTTGACATAATTCCTCCTGATACTGGAGTGCCACCGCCTCCTCCCCCCAAAAAGCAGAGTAAATTGAGAGCTTTACTGTTCAGGAAGAAATCCAGTGATTCTGCTAGTAAGCTGTCAAAGAGGCTTGCAGCTGTTAATATAGTAGAGGAATTGTTTGAAGAAGGATCAGCAATGCTCGCTGAAAGATTAGGGAACGAAGGGAATTCAGGGGAATCAACCTCTGGGATTTTTGTGTGCGCAGTGTGCCAGAAAGATATTGCTTCAAGTGAAGGCATATCTGTTCATGCTGGCTCCATTTTCTCTACCACCACTAAGCCTTGGCAAGGCCCCTTTCTTTGCGCTGATTGTCGCATCAAGAAGGACGCCATGGAAGGCAAGCGTCCTAGCGGAATTAGAGTCTCGTAG 1287 0.4569 MASGGGRRHHRNLVPLAALISREMKSEKMEKPTVRYGHAAQSKKGEDYFLIKTDCQRIPGSSSSPFSVYAIFDGHNGNAAAIFSRENLLNHILSALPQRIGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDRWTVTVASVGDSRCILDAQGGPITNLTVDHRLEENIEERERITASGGEVGRLSICGGAEIGPLRCWPGGLCLSRSIGDVDVGEFIVPIPYVKQVKLSNAGGRLIIASDGIWDALSSEMAAKSCRGLPAELAARQVVKEALRTRGLRDDTTCIVVDIIPPDTGVPPPPPPKKQSKLRALLFRKKSSDSASKLSKRLAAVNIVEELFEEGSAMLAERLGNEGNSGESTSGIFVCAVCQKDIASSEGISVHAGSIFSTTTKPWQGPFLCADCRIKKDAMEGKRPSGIRVS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2227g00004 428 PANTHER PROTEIN PHOSPHATASE 36 296 IPR015655 GO:0004722|GO:0006470
Pral2227g00004 428 SMART PP2C_4 27 295 IPR001932 -
Pral2227g00004 428 Pfam Protein phosphatase 2C 61 282 IPR001932 -
Pral2227g00004 428 CDD PP2Cc 36 297 IPR001932 -
Pral2227g00004 428 Gene3D - 33 300 IPR036457 -
Pral2227g00004 428 SUPERFAMILY PP2C-like 33 297 IPR036457 -
Pral2227g00004 428 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Pral2227g00004 428 SMART PP2C_SIG_2 50 297 IPR001932 -
Pral2227g00004 428 FunFam probable protein phosphatase 2C 5 35 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2227g00004 Pral-Chr2227 21041 25362 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2227g00004 1 427 PP2C-type Phosphatase Gene Family AT1G68410 76.606 0.0 675
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2227g00004 - - tcc:18609180 699.893