Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2225g00005 ATGAGACCTAACTTGGATCTTGAAGTGGAGGCTTCTGCGGAAAATGAATCTGAAATTAGCAGCCAGGTTGCATCCAACATATTCATTCATGAAATATCTGCAGGTCCTTCTAGTGACAGCCTCCACAACGCGTCAGACAACACAAACACCATAGTATTTCAACTAAGTAATTCAGATCCTCTTTCACTTGACTTAACTCTTAGCTCTAATAACAGCGCGCTAGGCCCTGCTAGAGACTCCATAGGACTCTCATTCTCAAGCACCAGTGAGAGCAGTAATGAACCTGCGTCTCAAACCACATCAGCCACCATCCAAAGAGTCTTCTCTTGCAACTACTGTCAGCGCAAGTTCTTCAGCTCACAGGCTCTCGGTGGCCACCAGAATGCACACAAGAGGGAAAGAACACTAGCAAAGAGAGCTATGAGAATGGGGTTTTTCTCTGAGAAGTATGCAAGTTTAGCATCCCTCCCTCTTCATGGCTCTTTCAGGTCGTTAGGAATAAAAGCACACTCCTCACTCCACCATGGCTTTTCACCATCAATGATGAGGCCTTACGAGATTAAAAGCAATGCAAGATTCGATCAAGGGCATGTTGGGATGCCAATGTTCATGGAGGATGATGAGGCAGAACTGCTATGGCCTGGTAGTTTCCGGCAGGTTGGAGAGGCAAGTGATAATGATAATACTCATCATCACCAACATCATCATCAGAAGTTTGTGGTCACTGGAAGTTCAAATTTGAGTTTTGCAGAAGTGAATCCGGAAGTACACCTTGAGCAAGAGGACTCAACACCAGATTTAACATTGAAACTATGA 816 0.4473 MRPNLDLEVEASAENESEISSQVASNIFIHEISAGPSSDSLHNASDNTNTIVFQLSNSDPLSLDLTLSSNNSALGPARDSIGLSFSSTSESSNEPASQTTSATIQRVFSCNYCQRKFFSSQALGGHQNAHKRERTLAKRAMRMGFFSEKYASLASLPLHGSFRSLGIKAHSSLHHGFSPSMMRPYEIKSNARFDQGHVGMPMFMEDDEAELLWPGSFRQVGEASDNDNTHHHQHHHQKFVVTGSSNLSFAEVNPEVHLEQEDSTPDLTLKL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2225g00005 271 ProSitePatterns Zinc finger C2H2 type domain signature. 110 130 IPR013087 -
Pral2225g00005 271 SUPERFAMILY beta-beta-alpha zinc fingers 105 135 IPR036236 -
Pral2225g00005 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 108 135 IPR013087 -
Pral2225g00005 271 FunFam Zinc finger protein 2 85 154 - -
Pral2225g00005 271 Gene3D Classic Zinc Finger 85 154 - -
Pral2225g00005 271 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 38 271 IPR044246 GO:0009788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2225g00005 Pral-Chr2225 37644 42999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2225g00005 90 271 C2H2 Transcription Factor Family AT1G66140 48.826 7.86e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2225g00005 - - pcin:129303090 443.351