Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2222g00001 ATGACTGGCTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGGAGGAAATGTGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAGCAAGGAGCTACCCATTTTGCAGCCATTCATAAGGTGTTTGGTGCAAGCAATGTTTCCAAGCTCCTTGCTCACCTCCCTGTGAGTGACCGGAGCGAAGCCGCCGTCACAATCGCCTACGAAGCTCAAGCTAGGCTCCAGGATCCTATCTATGGCTGTGTTTCTCATATATTCGCCCTCCAACAGCAGGTGGTCAATTTACAAGCACAGCTAGCTTATCTCAGGGAACAAGCAGCTCAAAACTTTCTTAATGCCTCTGCCACTGAAAACCCTAATGAAAAGTACTGTGGAAAACCTACTACTACTTTCCCTCACGACCTTCATGGTTGGTTCCAGACCGAAACTTCCGACACAGCAGGGCCTCATCAGTTTCTTCCTAACATATCTAATAATTCCTCGACAACAATACAACATTATGGGAGTAGCAGTAGCAATCCTTTCATGAATCTAAGCCCTACCGGGAATTATGAAAATTCAGGAACCCTGGAAGAAAGCATCTCATTTTCTAGCTTCGATGAGACTGCTTCTAACTCCATGTCCTATGACGTGCAAGCAAACAGCAAGCAGTGGGGCTTTCATGAAGCTGATGACCTTCAATCAGTGGCTTTTGGCTTCAGTCGATCGGCTTCATGA 723 0.4647 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVSDRSEAAVTIAYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLAYLREQAAQNFLNASATENPNEKYCGKPTTTFPHDLHGWFQTETSDTAGPHQFLPNISNNSSTTIQHYGSSSSNPFMNLSPTGNYENSGTLEESISFSSFDETASNSMSYDVQANSKQWGFHEADDLQSVAFGFSRSAS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2222g00001 240 Coils Coil 87 107 - -
Pral2222g00001 240 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Pral2222g00001 240 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Pral2222g00001 240 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2222g00001 Pral-Chr2222 1144 2130 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2222g00001 7 184 AS2 family AT3G58190 59.783 1.55e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral2222g00001 LOB 7.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2222g00001 K13945 - gmx:100776678 328.561