Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2221g00001 ATGGAGAGCACCGAATCGTCCACCGGTTCGCAGCAGCCGAATCTTCCGCCGGGTTTCCGGTTCCATCCGACCGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAGGCCTCCTCGGCTCCTCTGCCCGTCGCGATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCGTGGGAACTCCCAGCCAAGGCAGCGTTTGGAGAGCAGGAATGGTACTTTTTTAGCCCGAGGGATAGGAAGTACCCCAACGGAGCTAGGCCAAACAGGGCAGCGACATCTGGGTATTGGAAGGCTACCGGAACTGATAAGCCCGTGTTGACAGCTAATGGAAACCAGAAGGTTGGGGTGAAGAAAGCTTTAGTTTTCTATGGAGGGAAACCGCCGAGAGGGATCAAAACCAACTGGATCATGCATGAATATAGGCTTGCTGATAATAAGCCTAACAATAAACCTCCTGGGTGTGACTTGGGCAACAAGAAAAACTCTCTCCGGCTAGATGACTGGGTGCTGTGCCGAATATACAAGAAGAGCAACACACACAGATCGCCTATGGACCATGACGATTCATCGGTGGACGATATGATTGGAGGGGTTCCTCCTTCGATCCACGTTGGACAGATGAACGCCAGATTCCATCTTTCTAAGATGTCGACAACCTACGGCGCCGGAGGAGGATCATTGTTTTTAGACCCTAACAACGATCATAACCTACTCGAAGGGGTTGTCGCCGCCAACAACAACAATGGAATGAACACTGACCTTCCTAGTCTGGTCCCTCCTATGGCCTCTTCAAACCTTACTACTTCTGTTACAACCCTGCCTTCTAAACGAACACTCCCATCGCTGTATTGGAACCCGGATGAGGATTTGGCCGGAAGCTCCTCGAAAAGATTGAGCTTTGACAATAATGAGAATGGCGGGTGCAGTGGCGGCGGCGGAGGTGGCGGGGTTACTACTGCTGGAGCTAGTTCCATTGCTTCTCTGCTAAACCAGCTTCCACAGACTCCTTCAATGGTGGGATCTGTGGGAGATGGAATGTTTCGGACACAGTATCAAATTCCTGGAATGCATTGGTATGCTTAA 1083 0.5115 MESTESSTGSQQPNLPPGFRFHPTDEELVVHYLKKKASSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTANGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKSNTHRSPMDHDDSSVDDMIGGVPPSIHVGQMNARFHLSKMSTTYGAGGGSLFLDPNNDHNLLEGVVAANNNNGMNTDLPSLVPPMASSNLTTSVTTLPSKRTLPSLYWNPDEDLAGSSSKRLSFDNNENGGCSGGGGGGGVTTAGASSIASLLNQLPQTPSMVGSVGDGMFRTQYQIPGMHWYA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2221g00001 360 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Pral2221g00001 360 MobiDBLite consensus disorder prediction 1 20 - -
Pral2221g00001 360 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Pral2221g00001 360 MobiDBLite consensus disorder prediction 1 17 - -
Pral2221g00001 360 PANTHER NAC TRANSCRIPTION FACTOR 56 15 193 - -
Pral2221g00001 360 FunFam NAC transcription factor 56 24 181 - -
Pral2221g00001 360 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Pral2221g00001 360 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2221g00001 Pral-Chr2221 26504 28876 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2221g00001 1 360 NAC Transcription Factor Family AT3G15510 53.506 3.82e-125 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2221g00001 NAM 6.7e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2221g00001 - - gmx:100170710 521.546