Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral221g00021 ATGAGGGCAGGGAAAGGGAATCAGGAGGACGATGAGTACGAGGAGGAGGAGTTCGGTTCTAAAAAGGAAGGTCCTTCGTCTACGCCTAATAGCAATAACACCGGCAAAGATACAAAAGCTATTGATAAAGCTAGTGCTATAAGATCGAAACATTCAGTTACTGAGCAGCGAAGGCGGAGCAAGATAAATGAGAGATTCCAGATATTAAGAGATCTCATACCTCATAGTGATCAAAAGAGGGATACTGCATCATTCCTATTAGAGGTCATTGAGTATGTCCAGTACTTACAAGAGAAGGTGCAAAAGTATGAAGGTTCATATCAGGGTTGGGGTCAAGAGCCCACAAAGTTGATGCCTTGGAGAAACAGTCACTGGCGTGTTCAAGGCTATGGCCAACATCAAGCTGTGAAGAATGGTTCTGGTCCTGTGTCACCTTTCCGGAAGTTTGATGAAAGCAACATTAGTGTCTCTCCCACTGTGCTCAGTGGCTCCCAAAATACGATCGACCCTGAACAGAGCAGGGATATTATCAGTAAAACAGTGGAGAGGCAAGCTGAGTTAGAATGCAAGGCAGTACCTCTTCCAATGCCTATGCATGCAAACATGTCTGTTCCTGTCAGAAGCGATGGTGCACTAGCCCATCCTCTTCAGGGGCCTGTTTCTGATGGGCAATCAGCTGAATGTCCAGCCAATAGTGAACCTCAGAACCAACAGGAAGAGCTGACAATTGAGGGAGGAACAATCAACATCTCAAGTGTATACTCTCAAGGGCTGTTACACAACCTGACTCAAGCGCTACAGAGTGCTGGTTTAGATCTCTCACAGGCTAGCATTTCTGTTCAAATTAATCTTGGTAAGCGGGCAAACAAA 870 0.4552 MRAGKGNQEDDEYEEEEFGSKKEGPSSTPNSNNTGKDTKAIDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPTKLMPWRNSHWRVQGYGQHQAVKNGSGPVSPFPXKFDESNISVSPTVLSGSQNTIDPEQSRDIISKTVERQAELECKAVPLPMPMHANMSVPVRSDGALAHPLQGPVSDGQSAECPANSEPQNQQEELTIEGGTINISSVYSQGLLHNLTQALQSAGLDLSQASISVQINLGKRANK 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral221g00021 291 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 118 IPR036638 GO:0046983
Pral221g00021 291 FunFam BHLH domain class transcription factor 44 116 - -
Pral221g00021 291 MobiDBLite consensus disorder prediction 1 59 - -
Pral221g00021 291 MobiDBLite consensus disorder prediction 41 59 - -
Pral221g00021 291 MobiDBLite consensus disorder prediction 225 241 - -
Pral221g00021 291 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 6 291 IPR044295 GO:0003700|GO:0006351|GO:0046983
Pral221g00021 291 MobiDBLite consensus disorder prediction 208 241 - -
Pral221g00021 291 Gene3D - 44 116 IPR036638 GO:0046983
Pral221g00021 291 MobiDBLite consensus disorder prediction 23 39 - -
Pral221g00021 291 CDD bHLH_AtBIM_like 45 121 - -
Pral221g00021 291 SMART finulus 52 102 IPR011598 GO:0046983
Pral221g00021 291 Pfam Helix-loop-helix DNA-binding domain 48 97 IPR011598 GO:0046983
Pral221g00021 291 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 96 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral221g00021 Pral-Chr221 120255 124641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral221g00021 1 291 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 58.562 3.61e-114 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pral221g00021 HLH 1.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral221g00021 - - pcin:129321267 511.531