Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral221g00019 ATGGGAAAGAATGAGTTTCTTACACCAAAGGCTATTGCTAATCGAATCAAAGCAAAAGGGTTGCAAAAGCTTCGATGGTACTGTCAGATGTGTCAGAAACAATGCCGAGATGAGAATGGGTTCAAGTGTCATTGCATGAGTGAAAGTCACCAGCGCCAAATGCAAATCTTTGGACAAAATCCAAATAGGATCATTGAGGGCTACTCTGAAGAGTTTGAGAAGTCTTTTCTAGAACACATGAGGCGGAGCCACCGGTTCAGCCGGATAGCAGCTACAGTAGTTTACAATGAATACATTAGTGATAGACATCATGTTCATATGAATTCCACTAAATGGCTTACGCTAACTGAATTTGTCAAGTATTTGGGTCGGACTGGCAAGTGTAAGGTTGAAGAAACACCCAAAGGTTGGTTTATAACATACATTGATAGAGATTCTGAGACACTTTTCAAAGAGAGGATGAAGAACAAGAGGTTAAAGTCTGACATGGCTGAAGAAGAGAAGCAAGAGAAGGAGATACAGAGACAAATAGAAAAAGCAGAGCAGTTGATGAAGCAGCCATCTACCATTGGATCCGATCAACCTTCACAGGCTGAGCTTCCAAGAGAATTAAAAGTGGAAAATGGGGCTAAGGTTGGGTTTTCTCTTGGTTCATCAGCAAAACTTTCAACCGAGGAAAAACCAGAGGGACCAAATATAGTGTTCGACGAAGTTGAGGATGCCAAGAAGGAAGCAAGGAACCCCGTTGGCTCTTTGAAGAGTAAAGAGAGTGGTGGTGGGAAATCGACATTGGATGAACTGATGCGAGAAGAAGAGAAGAAGAAGGAGAAGATTAATAGAAAGGATTACTGGTTGTATCAGGGAATTGTTGTTAAGGTCATGAGCAAAGCTTTGGCTGATAAAGGGTATTACAAGCAAAAAGGTGTTGTATTAAAAGTGATCGACAAGTATGTTGGGGAAATAGAGATGGTTGAAAGCAAACATGTGCTCAGAGTTGATCAGGCTGAGCTTGAAACTGTGATTCCTCAAATTGGTTGTCTTGTCAAGATAGTAAATGGAGCTTATAGAGGATCCATAGCAAGATTATTAGGGGTTGATACCGATCACTTTTGTGCCAAGGTGCAGATAGAGAAAGGTCGTTATGATGGGAGAGTCCTCAAGGCAGTGGAGTACGAAGATATTTGCAAATTGGCCCAGTGA 1200 0.4158 MGKNEFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMSESHQRQMQIFGQNPNRIIEGYSEEFEKSFLEHMRRSHRFSRIAATVVYNEYISDRHHVHMNSTKWLTLTEFVKYLGRTGKCKVEETPKGWFITYIDRDSETLFKERMKNKRLKSDMAEEEKQEKEIQRQIEKAEQLMKQPSTIGSDQPSQAELPRELKVENGAKVGFSLGSSAKLSTEEKPEGPNIVFDEVEDAKKEARNPVGSLKSKESGGGKSTLDELMREEEKKKEKINRKDYWLYQGIVVKVMSKALADKGYYKQKGVVLKVIDKYVGEIEMVESKHVLRVDQAELETVIPQIGCLVKIVNGAYRGSIARLLGVDTDHFCAKVQIEKGRYDGRVLKAVEYEDICKLAQ 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral221g00019 399 Coils Coil 149 186 - -
Pral221g00019 399 SUPERFAMILY beta-beta-alpha zinc fingers 26 65 IPR036236 -
Pral221g00019 399 Gene3D - 60 160 IPR038254 -
Pral221g00019 399 Pfam Domain of Kin17 curved DNA-binding protein 52 177 IPR019447 -
Pral221g00019 399 Gene3D - 342 398 IPR014722 -
Pral221g00019 399 PANTHER KIN17 KIN, ANTIGENIC DETERMINANT OF RECA PROTEIN HOMOLOG 1 398 IPR037321 -
Pral221g00019 399 FunFam DNA/RNA-binding protein KIN17, putative 342 398 - -
Pral221g00019 399 SMART Kin17_mid_2 52 178 IPR019447 -
Pral221g00019 399 Pfam KN17 SH3-like C-terminal domain 280 333 IPR041330 -
Pral221g00019 399 MobiDBLite consensus disorder prediction 230 250 - -
Pral221g00019 399 Gene3D - 288 341 - -
Pral221g00019 399 Coils Coil 261 281 - -
Pral221g00019 399 MobiDBLite consensus disorder prediction 221 268 - -
Pral221g00019 399 FunFam DNA/RNA-binding protein KIN17, putative 61 160 - -
Pral221g00019 399 FunFam DNA/RNA-binding protein kin17-like 288 341 - -
Pral221g00019 399 CDD KOW_KIN17 344 397 IPR041995 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral221g00019 Pral-Chr221 108064 110783 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral221g00019 1 398 C2H2 Transcription Factor Family AT1G55460 71.014 0.0 585
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral221g00019 K13102 - gmx:100785931 654.055