Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2217g00006 ATGGCACTTGATGATCAAGGAGTTGGGTATTCTTCAAGTTGTTCTCGTTCAAATAGGAAACACAAGTATGACGTGTTTTTAAGTTTTCAAGGAGAAGCCACTCGTAAGAGTTTTACAGACCACTTATATGCTGCTTTGTGTCACAATGGACTGATAACTTTTAGAGATGAGGAAGAGCTTGGAAGGGGAGAAGTTATCAAACCATGTTTGCTTCAAGCAATAGAAGAATCTTTGTCTGCAATTGTTGTTCTATCTAAAAACTATGCTACTTCCACATGGTGTTTAGATGAGCTCCAAAAGATCCTTGATTGTAAGAAAGAGTTAGGCCTTCATATATTTCCAATCTTTTATGGCATGGATCCATCTGACGTTCAGCATCAAAAAGGAAGTTTTACAAAAGCCTTTGAAGAGCTTGAACAGAAATTTGCACATGACAAAGTGAAGGTGCAAAGATGGAGGGATGCTTTGAGAGAAGTTGCTGACTTGGCTGGCTGGAGCTCTGAAAATTGGTATGAAACGAAACTCATTGAGATAGTTACTGAAAAGGTAAGGTCAAGAATACATGGTCAACCACCATTCGATTCAAATGATGAAGGTGTTGATGATGGACTTGTTGGAATTGATGAGAAAATCGCAGATTTTGATTCAGTTCTGGCAATACATCAGAGGAAGTTCAATTTATCGGAATATGGGGAATGGGAGGTTTGTCAGTATGAAATGAATTTCTTAAGTCACGATGAATCCCTTCAACTTTTTATTCAAATAGCTTTCAAAGGAGATCAGCCAAATGAAGATTATTTAGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACCTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTTAAGAAGATTCCTTTAGACCGCCTTTTTGATATATTTAAAGTGAGCTTTGATGGACTGCGATATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGAGCAAGGTTGATGTCATACAAATTTTAGAAAATAGTGGTCTTCACCCAATAATCGGAATAAGAATTCTCATTGAGAAATCATTGGTAATTGAAGCTGAAGGGTGCTTGAGGGTGCATGATAGGCTTCAAGAAATGGGCAAGGAAATTGTTTTTCATGAATCACCCAATGATGCTGGCAACCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATCCGTGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGATGAACTTGTTGATCTTAAAATGCAAGACAGCAAATTAAAAGAACTTTTGAGAGGAACTGATCAGTTTCTACAATGTTTGAAATTCATTGATTTGAGTCATTCAACAAGCCTGATCAGAACACCAAATTTTGATAAAACTCCTAATCTTCGAAGACTAATTCTTAAAGGGTGTACCAAGCTTATTGAAGTTCACCAATCTCTCGGGCGCCACAAGAATCTTGTCATTGTTGATTTTAAAGGCATGGAACATTTATCTGAGCTTGATTTAGAGGGGACTGCTATATCTAAACTACCTCAATCATTGGTCAATTTGATTGGTCTTGCTCTATTAAATCTAGAGGATTGCAAAAATCTGGTTTGCTTTCCCAGAGATTTTCAGAAGTTGGAAGCTCTAAAGAAGATCAACATATCTGGTTGCGCAAAGTTTTCAAGGCTTCCAGAGAATTTGAATGAAAATAAGGTATTGGAAGTGCTTGATATGGGTGGTACTGCCATAAAAGAAGTGCCTTCATCCCTCAATAATTTAAAAGTATTATATCTTAGCAGATGCAATGGTTATGCACAATCATCATCATCATCATGGAATCACTATTGCTTCCTTCTCAAGCAGGCATTTAGGCTTCAAAGGCCTTCAACTTCAACAAAGTTTTTGTGGTCTCCATCTTTTTCAAGTCTATCATCTTTGGTCGAGTTAGATTTAAGTTCTTGTAATCTTGATGATGAATCACTATCCAGTGAAATCAGCAATTTATCATCATTGAGAATATTAGACTCGATGCCAGTATGTCAAGACTCAGATGATGATGATGATGATGGATGGACACTTTACAGATTAAATGACTTATCTGGTGCAATTTTGACTTGGAACAATTCACAAGATGACTTCTTCATCCAACCTACTCGCATATTAATTATTTCTGGTAGCGAAGTGCCATCATGGTTTCACAATCGAAGTTATTTTTGTGCGGAAGATTTCTCAGTTCTCTCTTTTGGGCCAAGAAATGTGTCATTCATTGCAAACAGGCGTGATTCATGCGGCTCAAGTAGTGAATGGTGGGGCATAGCAGTTTCAGGAAATGAATATCCAGATTCGTACCGTTTCTGTGGCACTTTTAATCAATCCATAAGTCGCCATCAACTATTTATCATCTACATTCGTTTTTCCTGCTCATTTGTTATGGAACAACCACTTCAAATGGCGTTTTCTATACATGAGAAGTCAGTTTTTCAAATAGGGCAGTATGGGTGGCGTGTAGTGTGTAAAGAAGATGTTGAGAGTTGGCGAAACAATATTGATGAAGGCTGTAGTTTCAGCACTGATGATAAGTTCATTGATGATACTAGATGA 2676 0.3756 MALDDQGVGYSSSCSRSNRKHKYDVFLSFQGEATRKSFTDHLYAALCHNGLITFRDEEELGRGEVIKPCLLQAIEESLSAIVVLSKNYATSTWCLDELQKILDCKKELGLHIFPIFYGMDPSDVQHQKGSFTKAFEELEQKFAHDKVKVQRWRDALREVADLAGWSSENWYETKLIEIVTEKVRSRIHGQPPFDSNDEGVDDGLVGIDEKIADFDSVLAIHQRKFNLSEYGEWEVCQYEMNFLSHDESLQLFIQIAFKGDQPNEDYLELSRRAINSAQNLPLAIKVLGSFLCGRSIPEWENALKKIPLDRLFDIFKVSFDGLRYNEKNIFLDIACFFNGLSKVDVIQILENSGLHPIIGIRILIEKSLVIEAEGCLRVHDRLQEMGKEIVFHESPNDAGNRSRIWSLEDASLVLRNMRGTEAIRVIDWKEYPLDSLPGQTQFDELVDLKMQDSKLKELLRGTDQFLQCLKFIDLSHSTSLIRTPNFDKTPNLRRLILKGCTKLIEVHQSLGRHKNLVIVDFKGMEHLSELDLEGTAISKLPQSLVNLIGLALLNLEDCKNLVCFPRDFQKLEALKKINISGCAKFSRLPENLNENKVLEVLDMGGTAIKEVPSSLNNLKVLYLSRCNGYAQSSSSSWNHYCFLLKQAFRLQRPSTSTKFLWSPSFSSLSSLVELDLSSCNLDDESLSSEISNLSSLRILDSMPVCQDSDDDDDDGWTLYRLNDLSGAILTWNNSQDDFFIQPTRILIISGSEVPSWFHNRSYFCAEDFSVLSFGPRNVSFIANRRDSCGSSSEWWGIAVSGNEYPDSYRFCGTFNQSISRHQLFIIYIRFSCSFVMEQPLQMAFSIHEKSVFQIGQYGWRVVCKEDVESWRNNIDEGCSFSTDDKFIDDTR 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2217g00006 891 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Pral2217g00006 891 PRINTS Disease resistance protein signature 277 291 - -
Pral2217g00006 891 PRINTS Disease resistance protein signature 666 682 - -
Pral2217g00006 891 FunFam Disease resistance protein (TIR-NBS-LRR class) 19 188 - -
Pral2217g00006 891 Gene3D - 242 323 IPR042197 -
Pral2217g00006 891 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 521 688 IPR044974 GO:0006952
Pral2217g00006 891 ProSiteProfiles TIR domain profile. 21 187 IPR000157 GO:0007165
Pral2217g00006 891 Gene3D - 16 190 IPR035897 -
Pral2217g00006 891 SMART till_3 22 162 IPR000157 GO:0007165
Pral2217g00006 891 Pfam NB-ARC domain 226 307 IPR002182 GO:0043531
Pral2217g00006 891 SUPERFAMILY L domain-like 377 701 - -
Pral2217g00006 891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 333 IPR027417 -
Pral2217g00006 891 Pfam TIR domain 22 183 IPR000157 GO:0007165
Pral2217g00006 891 Gene3D Ribonuclease Inhibitor 376 524 IPR032675 -
Pral2217g00006 891 Gene3D Ribonuclease Inhibitor 525 708 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2217g00006 Pral-Chr2217 72110 76153 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2217g00006 314 621 WRKY Transcription Factor Family AT4G12020 30.273 3.24e-36 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2217g00006 - - pcin:129317383 617.076