Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2217g00005 ATGAAACGAAACTCATTGAAAGTTATTGAAAATGTGAGGTCAAGAATAGTTGATCAACCACCATTCGATTCAAATGATGGTGTTGATGATGGACTTGTTGGAATTGATGAGAAAATAGCAGATTTTGACTCATTTCTAGCGAATAAATCGGAGGAAGTTCAATTTGTAGGAATATGGGGAATGGGAGGGTTAGGCAAAACTACTCTTGCTAGAGCTGTTTATGAGAGAATACACAGAAACTATGAAGTTCATTTATTTCTTCATAATGTTAGAGAGGAATCTGTAAAAGATGGTGGTTTAATTTCACTGCAACAAAAACTTCTTTCCCGTTTGAAAAAATCAATCAGAATGGAAGTGTGTGACTGTTATGATGGAAGAAAGCAAATAAGAAAAATGTTATGCAGTAAAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATAAGCCAACTTGAGAATTTGGCGGGAAAGGAAGGATGGTTTGGCGAAGGGAGTAGAATAATAATAACAACTAGAGATCAACATGTGTTATTGTTGCATGGTGTAGTTTCTCAATATGAAATGAATTTCTTAAGTCGCGATGAATCCCTTCAACTTTTTATTCAAATAGCTTTCAAAAGAGATCAGCCAAATGAAGATTATTTGGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACCTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGATGGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGATCTAATGAGAAGAAAATATTCTTAGACATTGCTTGCTTTTTCAATGGCTTGCGCAAGGTTGATGTCATACAGATTTTAGAAAATAGTGGTCTTGACCCGGTAATCGGACTAAGAACTCTTATTCAGAAATCATTGGTAACTGAAGCTGAAGGGTGCTTGAGGGTGCATGATAGGCTTCAAGAAATGGGCAAGGAAATTGTCTTTCGGGAATCACCCATTGATGCTGGCAATCGTAGTAGGATATGGTCCTCGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATACGTGGTATAGTGGTACAATTTGACAAAGCAGATGTCATATATTTGGACCCTAAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTATCATATCACATTCTTCAGATGACCAATTGAATCTTCTTCATGGACTTAACTGTCTTCCCAATTCACTGAAAGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGATGAACTTGTTGATCTCAAAATGCAACGCAGCAAATTAAAGGAACTTTGGAGAGGAGATCAGTTTCCACAAAGTCTAAAGTTCATTGATTTGAGTCATTCAACAAACCTGATGAGAACATCAAATTTTGATAGAACTCCTAATCTTCAAAGCTTAATTCTTGAAGGGTGTACAAAGCTTGTTGAAGTTCACTGCTCTCTCGGGCAACACAAGAATCTTGTCATTGTTAATTTTAAAGGTTGCAAAAGTATTAAAAAACTTCCAACCAAATTGGAGATGAATTGCTTAGAGACATTTATTCTCTCTGGTTGTTCAAAAGTTAAGAGGCTTCCTGAGTTTGGAAAAGGTATGACATGTTTATCAGAGCTTAATCTAAAAGGGACTGCTATATCCAAGCTACCTCAATCATTGGTCAATTTGACTGGCCTTGCTATATTAAATTTAGAGTATTGCAAAAACCTGGTATGTCTTCCAAGTGATTTTAAAAAATTGAAAGCTATCAAGGAGATCAATATTCGTGGTTGCTCAAAGTTCTCAAGGCTTCCAGAGAATTTGAATGAAAATGAGGCATTGGAGGAGCTTGATGTGAGTGGAACCGCTCTAAAAGAAGTGCCTTCGTCCCTCAATAATTTGAAAGCATCATCTCTTAGTGCATGCAATGCTTCTGCACAATCATCCTCATGGAGTCACTCCTCCCTTCTCAAGCGGGCATTTAGACTTCAAAGGCCTTCAAGTTCAACTAAGTTTTTGTGGTCTCCATCTTTTTCAAATCTGTCATCTTTGGTCCAGTTACATTTAAATTATTGCAATCTTGATGATGAATCACTATTCAGTGAAATAGGCAATTTATCATCATTGACAACATTAGGTTTGCGTGGAAATAATTTTGTTGAAATTCCTTTGAGCTTCGTTTCCAAACTTCGAAAGCTTGAATTTATTTATTTGGATGATTGCCAAAGGCTTCGGTCTTTGCCTCAACTTCCAGCAAACCTGTCAATGATATGTGCTAGTGATTGTCCATTATTGAAACATTATGTGTGTTCGCAACAACTATGGGAATTCACTGAGGAATTTGAATATCAGACTCCATGCCGATTTGAAGTTTCATTAGGAGATGGAGATAAAGTTTACAATTTCAATGACGGGATGTCTGGTATTGTGAGTTGGAACAATTCACAAGTTGATGACTTCTTCCTGCAACCGACTCGCATATTAACTATTCCTGGTAGAAAAGTGCCATCATGGTTTCACAATCAGAGCTATTTTTGCGCGAAAGATCTCCCATTTTGGTATACTCCAACAAATGTGTCATTCATAGTAAATAAGCCTGATTCATGCTGTTCAAGTGAATGGTGGGGCATAGCTGTATGCTTAGTGCTAGAAAATGATTTGCAACGCGCAAACTATGATGATCATGCCCTACTTAGTTGGACTTATAGAGTTTCTGAAGGTGAATATCCAAATTCATTCCGTCTTTACGGCACTTGGGCGCAGTCCAGATTTCGCCACCAACTATGTATCATTTACATTCGTTTTTCCTCATTTGTTGTGGAAAAACCACTTCAAATGGTTTTTTTCATGGCGAAGAAACCGGAGGAGTCACCTTTGAAAATAGTGCAGTGTGGGTGGCGTGTGTTGTGTAAAGAGGATGTTGAGAGACGGCGAAACACAAGTAGTGACGAAGGCTGGAGTGTCAGCACTACTGATGATAAGTTCATTGATGAATGTAGATGA 3060 0.3778 MKRNSLKVIENVRSRIVDQPPFDSNDGVDDGLVGIDEKIADFDSFLANKSEEVQFVGIWGMGGLGKTTLARAVYERIHRNYEVHLFLHNVREESVKDGGLISLQQKLLSRLKKSIRMEVCDCYDGRKQIRKMLCSKKVLLVLDDVSDISQLENLAGKEGWFGEGSRIIITTRDQHVLLLHGVVSQYEMNFLSRDESLQLFIQIAFKRDQPNEDYLELSRRAINSAQNLPLAIKVLGSFLCGRSIPEWENALKKIPLDGLFDILKVSFDGLRSNEKKIFLDIACFFNGLRKVDVIQILENSGLDPVIGLRTLIQKSLVTEAEGCLRVHDRLQEMGKEIVFRESPIDAGNRSRIWSSEDASLVLRNMRGTEAIRGIVVQFDKADVIYLDPKAFSNMSNLKLLIISHSSDDQLNLLHGLNCLPNSLKVIDWKEYPLDSLPGQTQFDELVDLKMQRSKLKELWRGDQFPQSLKFIDLSHSTNLMRTSNFDRTPNLQSLILEGCTKLVEVHCSLGQHKNLVIVNFKGCKSIKKLPTKLEMNCLETFILSGCSKVKRLPEFGKGMTCLSELNLKGTAISKLPQSLVNLTGLAILNLEYCKNLVCLPSDFKKLKAIKEINIRGCSKFSRLPENLNENEALEELDVSGTALKEVPSSLNNLKASSLSACNASAQSSSWSHSSLLKRAFRLQRPSSSTKFLWSPSFSNLSSLVQLHLNYCNLDDESLFSEIGNLSSLTTLGLRGNNFVEIPLSFVSKLRKLEFIYLDDCQRLRSLPQLPANLSMICASDCPLLKHYVCSQQLWEFTEEFEYQTPCRFEVSLGDGDKVYNFNDGMSGIVSWNNSQVDDFFLQPTRILTIPGRKVPSWFHNQSYFCAKDLPFWYTPTNVSFIVNKPDSCCSSEWWGIAVCLVLENDLQRANYDDHALLSWTYRVSEGEYPNSFRLYGTWAQSRFRHQLCIIYIRFSSFVVEKPLQMVFFMAKKPEESPLKIVQCGWRVLCKEDVERRRNTSSDEGWSVSTTDDKFIDECR 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2217g00005 1019 Gene3D Ribonuclease Inhibitor 680 799 IPR032675 -
Pral2217g00005 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 596 IPR044974 GO:0006952
Pral2217g00005 1019 SUPERFAMILY "Winged helix" DNA-binding domain 259 362 IPR036390 -
Pral2217g00005 1019 Gene3D - 190 271 IPR042197 -
Pral2217g00005 1019 Gene3D Ribonuclease Inhibitor 375 535 IPR032675 -
Pral2217g00005 1019 Gene3D Ribonuclease Inhibitor 536 674 IPR032675 -
Pral2217g00005 1019 Gene3D - 26 181 IPR027417 -
Pral2217g00005 1019 SUPERFAMILY L domain-like 384 790 - -
Pral2217g00005 1019 PRINTS Disease resistance protein signature 225 239 - -
Pral2217g00005 1019 PRINTS Disease resistance protein signature 132 146 - -
Pral2217g00005 1019 PRINTS Disease resistance protein signature 55 70 - -
Pral2217g00005 1019 PRINTS Disease resistance protein signature 580 596 - -
Pral2217g00005 1019 Pfam Leucine Rich Repeat 445 463 IPR011713 -
Pral2217g00005 1019 Pfam NB-ARC domain 49 254 IPR002182 GO:0043531
Pral2217g00005 1019 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 281 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2217g00005 Pral-Chr2217 61217 64664 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2217g00005 32 655 WRKY Transcription Factor Family AT4G12020 32.555 2.08e-84 298
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2217g00005 - - pcin:129318967 923.309