Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2217g00001 ATGGAAGTGTGTGACTGTTATGATGGAAGAAAGCTGATAAGAAGAATGTTATGCAGTAAAAAAGTTCTACTTGTCCTTGATGATGTGAGTGACATAAGCCAACTTGAGAATTTGGCTGGAAAGGAAGGATGGTTTGGCAAAGGGAGCAGAATAATAATAACAACTAGAGATCAACATGTGTTATTGTTGCATGGTGTAGTTTCTCAGTATGAAATGAATTTCTTAAGTCACGATGAATCCCTTCAACTTTTTATTCAAATAGCTTTCAAAGGAGATCAGCCAAATGAAGATTATTTGGAGCTTTCTAGAAGGGCGATTAATTCTGCTCAAAACCTTCCTTTGGCAATCAAAGTGCTTGGTTCATTTCTTTGTGGAAGAAGCATACCAGAATGGGAGAATGCACTCAAGAAGATTCCTTTAGATGGCCTTTTTGATATACTTAAAGTGAGCTTTGATGGACTGCGAGATAATGAGAAGAATATATTCTTAGATATTGCTTGCTTTTTCAATGGCTTGCGCAAGGATGATGTCATACAGATTTTAGAAAATAGTGGTCTTCACCCAATAATCGGAATAAGAACTCTTATTCAGAAATCATTGGTAACTGAAGCTAAAGGGCGCTTGAGGGTGCATGATAGGCTTCAAGAAATGGGCAAGGAAATTGTTTTTCGCGAATCAACCAATGATGCTGGCAATCGTAGTAGGATATGGTCCTTGGAGGATGCTAGTCTTGTGCTTAGAAATATGAGGGGAACTGAAGCAATACGTGGTATAGTGGTACAATTTGACAAACCAGATGTCATATATTTGGAACCTAAAGCCTTCTCAAATATGAGTAATCTCAAGTTACTTATCATATCACATTCTTCACATGACCAATTGAATCTTCTTCATGGACTTAACTGTCTCCCCAATTCACTGAAAGTCATAGATTGGAAGGAGTATCCTTTAGATTCCCTTCCAGGTCAAACTCAATTTGATGAACTTGTTGATCTCAAAATGCAACACAGCAAATTAAAGGAACTTTGGAGGGGAGATCAGTTTCCACAAAGTCTAAAGTTCATTGATTTGAGTCATTCAACAAACCTGATGAGAACATCAAACTTTGATAGAACTCCTAATCTTCAAAGATTAATTCTTAAGGGGTGTACAAAGCTTGTTGAAGTTCACTGCTCTTTCGGGCAACACAAGAATCTTGTCATTGTTAATTTTAAAGGTTGTAAAAGTATTAAAAACCTTCCAACCAAATTGGAGATGAATTGCTTAGAGACATTTATTCTCTCTGGTTGTTCAAAAGTTAAGAGGCTTCCTGAGTTTGGAAAAGGGATGACATGTTTATCAAAGCTTAATCTAAAAGGGACTGCTATATCCAAACTACCTCAATCATTGGTCAATTTGACTGGTCTTGTTATATTGAATTTAAAGTATTGCAAAAGCCTGGTATGTCTTCCAAGTGATTTTAAAAAATTGAAAGCTATAAAGAAGATCAATATTCGTGGCTGCTCAAAGTTGTCAAGGCTTCCAGAGAATTTGAATGAAAATGAGGCATTGGAGGAGCTTGATGTGGGTGGGACTGCTCTAAAAGAAGTGCCTTCGTCCCTCAATAATTTGAAAGTATTATCTCTTAGTGCATGCAATGCTTCTGCACAATCATCCTCATGGAATCACTTCTGCCTTCTCAAGCGGGCATTTAGGCTTCAAAGGCCTTCAAGTTCAACTAAGTTTTTGTGGTCTCCATCTTTTTCAAATCTATCATCTTTGGTCGAGTTACATTTAAATGGTTGCAATCTTGATGATGAATCACTATCCAGTGAAATAGGCAATTTATCATCATTGACAGCATTAGGATTGCCCAAGGCTTCGGTCTTTGCCTCAACTTCCAGCAAACCTGTCAGTGATACATGCTGGTGA 1911 0.3741 MEVCDCYDGRKLIRRMLCSKKVLLVLDDVSDISQLENLAGKEGWFGKGSRIIITTRDQHVLLLHGVVSQYEMNFLSHDESLQLFIQIAFKGDQPNEDYLELSRRAINSAQNLPLAIKVLGSFLCGRSIPEWENALKKIPLDGLFDILKVSFDGLRDNEKNIFLDIACFFNGLRKDDVIQILENSGLHPIIGIRTLIQKSLVTEAKGRLRVHDRLQEMGKEIVFRESTNDAGNRSRIWSLEDASLVLRNMRGTEAIRGIVVQFDKPDVIYLEPKAFSNMSNLKLLIISHSSHDQLNLLHGLNCLPNSLKVIDWKEYPLDSLPGQTQFDELVDLKMQHSKLKELWRGDQFPQSLKFIDLSHSTNLMRTSNFDRTPNLQRLILKGCTKLVEVHCSFGQHKNLVIVNFKGCKSIKNLPTKLEMNCLETFILSGCSKVKRLPEFGKGMTCLSKLNLKGTAISKLPQSLVNLTGLVILNLKYCKSLVCLPSDFKKLKAIKKINIRGCSKLSRLPENLNENEALEELDVGGTALKEVPSSLNNLKVLSLSACNASAQSSSWNHFCLLKRAFRLQRPSSSTKFLWSPSFSNLSSLVELHLNGCNLDDESLSSEIGNLSSLTALGLPKASVFASTSSKPVSDTCW 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2217g00001 636 Gene3D - 4 65 IPR027417 -
Pral2217g00001 636 SUPERFAMILY L domain-like 268 617 - -
Pral2217g00001 636 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 438 IPR044974 GO:0006952
Pral2217g00001 636 Gene3D - 74 155 IPR042197 -
Pral2217g00001 636 Pfam Leucine Rich Repeat 329 347 IPR011713 -
Pral2217g00001 636 PRINTS Disease resistance protein signature 532 548 - -
Pral2217g00001 636 PRINTS Disease resistance protein signature 16 30 - -
Pral2217g00001 636 PRINTS Disease resistance protein signature 109 123 - -
Pral2217g00001 636 Pfam NB-ARC domain 12 138 IPR002182 GO:0043531
Pral2217g00001 636 SUPERFAMILY "Winged helix" DNA-binding domain 143 246 IPR036390 -
Pral2217g00001 636 Gene3D Ribonuclease Inhibitor 266 440 IPR032675 -
Pral2217g00001 636 Gene3D Ribonuclease Inhibitor 441 625 IPR032675 -
Pral2217g00001 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 165 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2217g00001 Pral-Chr2217 359 2729 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2217g00001 12 540 WRKY Transcription Factor Family AT4G12020 33.333 3.40e-76 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2217g00001 - - pcin:129318967 627.861