Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00008 ATGTCTTTGCTGCCTCCGGAAACATCTCAGCCTGGCAACTCCACGGCTCCTCCTCCGCCTCCTGTCACCACCAATGACACCTCTCCTCCAGCTCCGAGTAATTCCATGTCACCTACCGCCACTCCGTCGGCGCCACCTCCTCCGGGCGCGCCTCAGACGCCGGCGGCGGACTCAGACGGACTGTCCAACGCTGCAATAGCCGGACTAGTTGTCGGAACTGTGTTTGGCTCGCTGCTTATGCTCGCTTGTGTGGGCATTTGTGCTTTTTTCTATAAAAGAAGAAAGCGGAGGAGGATGAGCAAATATGGGATGAACGATCACTCTGCTGCTCCTCCATCCCAACCCAAAGCTGATCAGTTTGGTGGTCCGCCCCAGCAATGGCAGCATAGCATTCCTCCTCCAACCGATGGTGGAGCGACATTGCCTCCCAAGCCAAGTCCATCCCCTGGAGTTCTGTTGAATCAGCAAGCATCTCCTCCTATATATTCTGCAAGTGGCACAAGTCTGGAATCTGAGAGGCCATACCATGCACCATCGCCTGCCATTGCCTTTGGACTCTCACAAATCTCGTTTACATATGAAGAACTTGCGTTGGCAACAAATGGATTCTCAGACTCAAATCTTCTTGGTCAAGGTGGGTTTGGCTATGTCCATAAAGGAGTTCTCCGAAATGGGAAAACTGTTGCAATTAAGCAGCTGAAATCTGGAAGCAGACAGGGGGAGCGTGAGTTCCAGGCTGAAGTGGAGATCATTAGTCGAGTCCATCACAGACATCTTGTTTCCTTAGTTGGATACTGCATTGCTGGAGTCCAGAGGATGCTTGTATATGAGTTTGTCCCAAACAATACACTAGAATTCCATTTACATGGAAAAGATAGAGCAACAATGGACTGGGCAACAAGGATAAAAATTGCTATTGGATCTGCAAAGGGATTGGCTTATCTGCATGAGGACTGTCACCCAAAAATCATACATCGTGACATCAAGGCATCAAACATTCTTCTTGATGACAAGTTTGAGGCGAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATCAGATGCCGAGACCCACGTCTCCACTCGAGTAATGGGAACCTTTGGATACCTGGCTCCAGAATATGCTGCCAGTGGGAAGCTCACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTACTTTTGGAGTTGATTACAGGGCGAAGACCTGTTGATAAAACTCAGTCTTTTACAGATGACAGTATGGTTGAGTGGGCAAGGCCTTTGCTTTCTCAAGCTATGGAAAATGGCAACTTCGATGCTCTTGCTGATCCAAGGTTGCAGAATAGTTACAACTCTGAGGAGATGCTTCGAATGATTGCCTGCGCTGCAAATTGTGTGCGCTATTCAGCTAGGCATCGGCCTCGAATGAGCCAGGTAGTTCGGGCTCTAGAAGGCAATATTTCTTTGGATGATCTGAATGAGGGGAGCACATCTGGGCACAGCAGAGCACTTAGTTCCTTCGAAAGTTCAGGTTATGATACTGGCCAATACAATGAGGACCTAAAGAAGTTCAGGAAGCTGGCACTAGAGCAAGAAACTAGTGAATACAGTGGCCCCAGTAGCGATTATGGTCAGCAACGGTCTGCCTCAAGCAGTTCAGGCCCGCAAAATACGCAGGAGAAATAA 1665 0.4865 MSLLPPETSQPGNSTAPPPPPVTTNDTSPPAPSNSMSPTATPSAPPPPGAPQTPAADSDGLSNAAIAGLVVGTVFGSLLMLACVGICAFFYKRRKRRRMSKYGMNDHSAAPPSQPKADQFGGPPQQWQHSIPPPTDGGATLPPKPSPSPGVLLNQQASPPIYSASGTSLESERPYHAPSPAIAFGLSQISFTYEELALATNGFSDSNLLGQGGFGYVHKGVLRNGKTVAIKQLKSGSRQGEREFQAEVEIISRVHHRHLVSLVGYCIAGVQRMLVYEFVPNNTLEFHLHGKDRATMDWATRIKIAIGSAKGLAYLHEDCHPKIIHRDIKASNILLDDKFEAKVADFGLAKFSSDAETHVSTRVMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRRPVDKTQSFTDDSMVEWARPLLSQAMENGNFDALADPRLQNSYNSEEMLRMIACAANCVRYSARHRPRMSQVVRALEGNISLDDLNEGSTSGHSRALSSFESSGYDTGQYNEDLKKFRKLALEQETSEYSGPSSDYGQQRSASSSSGPQNTQEK 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00008 554 Gene3D Phosphorylase Kinase; domain 1 165 278 - -
Pral2213g00008 554 MobiDBLite consensus disorder prediction 485 509 - -
Pral2213g00008 554 FunFam Proline-rich receptor-like protein kinase PERK1 279 487 - -
Pral2213g00008 554 MobiDBLite consensus disorder prediction 35 53 - -
Pral2213g00008 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Pral2213g00008 554 Pfam Protein tyrosine and serine/threonine kinase 207 476 IPR001245 GO:0004672|GO:0006468
Pral2213g00008 554 SUPERFAMILY Protein kinase-like (PK-like) 179 476 IPR011009 -
Pral2213g00008 554 SMART serkin_6 203 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00008 554 ProSiteProfiles Protein kinase domain profile. 203 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00008 554 MobiDBLite consensus disorder prediction 526 554 - -
Pral2213g00008 554 FunFam proline-rich receptor-like protein kinase PERK1 181 278 - -
Pral2213g00008 554 ProSitePatterns Protein kinases ATP-binding region signature. 209 231 IPR017441 GO:0005524
Pral2213g00008 554 MobiDBLite consensus disorder prediction 1 57 - -
Pral2213g00008 554 MobiDBLite consensus disorder prediction 523 554 - -
Pral2213g00008 554 MobiDBLite consensus disorder prediction 11 27 - -
Pral2213g00008 554 MobiDBLite consensus disorder prediction 101 157 - -
Pral2213g00008 554 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 79 525 IPR047117 -
Pral2213g00008 554 Gene3D Transferase(Phosphotransferase) domain 1 279 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00008 Pral-Chr2213 224456 229728 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00008 13 547 Trihelix Transcription Factor Family AT1G70460 51.376 2.18e-169 495
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2213g00008 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00008 - - aip:107617256 707.597