Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00007 ATGATGATAGTGGGGTTAGTATCTGCTGGTTTGTTTATATGGAGAAGGAACAGGGCGAGAGAAAGAGAAAACCCCTCTGCACCACCACAACCCCAAGTATGTATTTTTGCAGACGTCAACCACCCACAGTTAGAAAGCCATGACCGGCCATCAGCCTCGGCCATGACTTCTCAATCACAACTAGAGACACACTTGAACGAAGAAGCCACAGCTCTTCGACGGCGATATGTCTTTGCCCTCTCTGCCTGTACGCCACAAGACTCCCGGCCGTCCCGCCGCCTCCTCTCCTACAGTGATGAATACTCTATAGAGTTGGCACCGTCTACCTCGCCATCTCTAACCTCGCCGTCTCCCTCGCCCTCTTACCCGCCGCCTCCTTCCCCACCGGCCGGACCACAGCTAGGCGATCTATTACTGGGGGCTTTGCTTAGCTCGCTGATGACTCTGTTGCTGCTGACTTTGGTGATTGGTGTCTTTTACGTATGGAGAAAGAGGAGGCACTCACCACAACCACCAAACCAACCAGCAGCTGCTGAAGAGGTTGCAGTCTCGCTTCTACCATCTTCCATTGCTTTTGAACACTCACCGGGCACATTTACATATGAAGAATTAGAGTTGGCAACAGATGGATTCTCAGAGTCAAATTTTCTGGGCCAAGGCGGTTTTGGCACTGTCCATAAAGGAGTTCTTCCTAAAAATAATCAAAGTGTCGCCATTAAGCAGCAAAGATCTGGAAGCAGACAGGGAATGCAAGAGTTCCAGACTGAAGTGAAGGTCATTAGTCGAGTCCATCACAGACATCTTGTTTCCCTTGTTGGCTACTGCATTGCTGAATCTCAAAGGACGTTGATGCTTGTTTATGAGTTTGTCCCTAATAAAACCCTAGACTTCCAACTCCACGGAGAAGATACAGAAACTCTGGACTGGTCAACAAGGATGAAGATTGCTAATGGCTCTGCAAAGGGATTGGCATATCTGCATGAAGACTGTGAACCCAAAATCATACATCGTGACATCAAGGCAGCAAACATTCTTATTGATAACAATTTTGAGCCAAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGATACCCATGTCACTACAGCTCGAATAAAAGGAACCTTTGGATACTTGGCTCCAGAATATGCATCTAGCGGGAGACTCACAGAGAAGGCAGATGTCTTCTCCTTTGGTGTCGTGCTCTTGGAGTTGATTACTGGCCGAAAACCTGTTCTTCAAACTGGGTCTTTTACAGAAGACAGCCTGGTTGAGTGGGCAAGAAGGTTACTCTCCACGGCATTGGATAATCGAAATTTTGAGGTTCTTGCTGATCCAAAGTTGCAGAATAATTACAACTCCGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGTGTGCGCCACTCAGCAGATCGTCGTCCTCGAATGAGCCAGGTAGTGGATGGTTTAGCAGGAAAGATTAGCGTGGATAATTGGAACGAGGAGAGCACAGAAGTGGACCTGAACAAGTTTTGGAAGGGGGCACTAGGCGGAGGCAATAGCACTGGAGAATACAGTGAACCTAGCAGTTCATCAAGCCGCGAAAATACAACTGAAGGCTCTTCTTGA 1623 0.475 MMIVGLVSAGLFIWRRNRARERENPSAPPQPQVCIFADVNHPQLESHDRPSASAMTSQSQLETHLNEEATALRRRYVFALSACTPQDSRPSRRLLSYSDEYSIELAPSTSPSLTSPSPSPSYPPPPSPPAGPQLGDLLLGALLSSLMTLLLLTLVIGVFYVWRKRRHSPQPPNQPAAAEEVAVSLLPSSIAFEHSPGTFTYEELELATDGFSESNFLGQGGFGTVHKGVLPKNNQSVAIKQQRSGSRQGMQEFQTEVKVISRVHHRHLVSLVGYCIAESQRTLMLVYEFVPNKTLDFQLHGEDTETLDWSTRMKIANGSAKGLAYLHEDCEPKIIHRDIKAANILIDNNFEPKIADFGLAKLSSDTDTHVTTARIKGTFGYLAPEYASSGRLTEKADVFSFGVVLLELITGRKPVLQTGSFTEDSLVEWARRLLSTALDNRNFEVLADPKLQNNYNSEEMFRMASCAANCVRHSADRRPRMSQVVDGLAGKISVDNWNEESTEVDLNKFWKGALGGGNSTGEYSEPSSSSSRENTTEGSS 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00007 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 334 346 IPR008271 GO:0004672|GO:0006468
Pral2213g00007 540 MobiDBLite consensus disorder prediction 106 131 - -
Pral2213g00007 540 ProSitePatterns Protein kinases ATP-binding region signature. 217 240 IPR017441 GO:0005524
Pral2213g00007 540 Pfam Protein tyrosine and serine/threonine kinase 215 486 IPR001245 GO:0004672|GO:0006468
Pral2213g00007 540 ProSiteProfiles Protein kinase domain profile. 211 498 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00007 540 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 186 289 - -
Pral2213g00007 540 MobiDBLite consensus disorder prediction 113 131 - -
Pral2213g00007 540 Gene3D Transferase(Phosphotransferase) domain 1 290 509 - -
Pral2213g00007 540 FunFam proline-rich receptor-like protein kinase PERK8 290 503 - -
Pral2213g00007 540 MobiDBLite consensus disorder prediction 520 540 - -
Pral2213g00007 540 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 150 511 IPR047117 -
Pral2213g00007 540 CDD STKc_IRAK 217 488 - -
Pral2213g00007 540 Gene3D Phosphorylase Kinase; domain 1 197 289 - -
Pral2213g00007 540 SMART serkin_6 211 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00007 540 SUPERFAMILY Protein kinase-like (PK-like) 191 486 IPR011009 -
Pral2213g00007 540 MobiDBLite consensus disorder prediction 516 540 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00007 Pral-Chr2213 143251 152301 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00007 106 540 Trihelix Transcription Factor Family AT1G70460 45.565 1.25e-126 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2213g00007 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00007 - - pcin:129289307 473.781