Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00006 ATGATGATAGTGGGGTTAGTATCTGCTGGTTTGTTTATATGGAGAAGGAACAGGGCGAGAGAAAGAGAAAACCCCTCTGCACCACCACAACCCCAAGACGTCAACCACCCACAGTTAGAAAGCCATGACCGGCCATCAGCCTCGGCCATGACTTCTCAATCACAACTAGAGACACACTTGAACGAAGAAGCCACAGCTCTTCGACGGCGATATGTCTTTGCCCTCTCTGCCTGTACGCCACAAGACTCCCGGCCGTCCCGCCGCCTCCTCTCCTACAGTGATGAATACTCTATAGAGTTGGCACCGTCTACCTCGCCATCTCTAACCTCGCCGTCTCCCTCGCCCTCTTACCCGCCGCCTCCTTCCCCACCGGCCGGACCACAGCTAGGCGATCTATTACTGGGGGCTTTGCTTAGCTCGCTGATGACTCTGTTGCTGCTGACTTTGGTGATTGGTGTCTTTTACGTATGGAGAAAGAGGAGGCACTCACCACAACCACCAAACCAACCAGCAGCTGCTGAAGAGGTTGCAGTCTCGCTTCTACCATCTTCCATTGCTTTTGAACACTCACCGGGCACATTTACATATGAAGAATTAGAGTTGGCAACAGATGGATTCTCAGAGTCAAATTTTCTGGGCCAAGGCGGTTTTGGCACTGTCCATAAAGGAGTTCTTCCTAAAAATAATCAAAGTGTCGCCATTAAGCAGCAAAGATCTGGAAGCAGACAGGGAATGCAAGAGTTCCAGACTGAAGTGAAGGTCATTAGTCGAGTCCATCACAGACATCTTGTTTCCCTTGTTGGCTACTGCATTGCTGAATCTCAAAGGACGTTGATGCTTGTTTATGAGTTTGTCCCTAATAAAACCCTAGACTTCCAACTCCACGGAGAAGATACAGAAACTCTGGACTGGTCAACAAGGATGAAGATTGCTAATGGCTCTGCAAAGGGATTGGCATATCTGCATGAAGACTGTGAACCCAAAATCATACATCGTGACATCAAGGCAGCAAACATTCTTATTGATAACAATTTTGAGCCAAAGATTGCAGATTTTGGACTTGCCAAACTTTCATCAGACACTGATACCCATGTCACTACAGCTCGAATAAAAGGAACCTTTGGATACTTGGCTCCAGAATATGCATCTAGCGGGAGACTCACAGAGAAGGCAGATGTCTTCTCCTTTGGTGTCGTGCTCTTGGAGTTGATTACTGGCCGAAAACCTGTTCTTCAAACTGGGTCTTTTACAGAAGACAGCCTGGTTGAGTGGGCAAGAAGGTTACTCTCCACGGCATTGGATAATCGAAATTTTGAGGTTCTTGCTGATCCAAAGTTGCAGAATAATTACAACTCCGAAGAGATGTTTCGAATGGCTTCTTGTGCTGCAAATTGTGTGCGCCACTCAGCAGATCGTCGTCCTCGAATGAGCCAGGTAGTGGATGGTTTAGCAGGAAAGATTAGCGTGGATAATTGGAACGAGGAGAGCACAGAAGTGGACCTGAACAAGTTTTGGAAGGGGGCACTAGGCGGAGGCAATAGCACTGGAGAATACAGTGAACCTAGCAGTTCATCAAGCCGCGAAAATACAACTGAAGGCTCTTCTTGA 1608 0.477 MMIVGLVSAGLFIWRRNRARERENPSAPPQPQDVNHPQLESHDRPSASAMTSQSQLETHLNEEATALRRRYVFALSACTPQDSRPSRRLLSYSDEYSIELAPSTSPSLTSPSPSPSYPPPPSPPAGPQLGDLLLGALLSSLMTLLLLTLVIGVFYVWRKRRHSPQPPNQPAAAEEVAVSLLPSSIAFEHSPGTFTYEELELATDGFSESNFLGQGGFGTVHKGVLPKNNQSVAIKQQRSGSRQGMQEFQTEVKVISRVHHRHLVSLVGYCIAESQRTLMLVYEFVPNKTLDFQLHGEDTETLDWSTRMKIANGSAKGLAYLHEDCEPKIIHRDIKAANILIDNNFEPKIADFGLAKLSSDTDTHVTTARIKGTFGYLAPEYASSGRLTEKADVFSFGVVLLELITGRKPVLQTGSFTEDSLVEWARRLLSTALDNRNFEVLADPKLQNNYNSEEMFRMASCAANCVRHSADRRPRMSQVVDGLAGKISVDNWNEESTEVDLNKFWKGALGGGNSTGEYSEPSSSSSRENTTEGSS 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00006 535 Gene3D Phosphorylase Kinase; domain 1 192 284 - -
Pral2213g00006 535 MobiDBLite consensus disorder prediction 108 126 - -
Pral2213g00006 535 ProSitePatterns Protein kinases ATP-binding region signature. 212 235 IPR017441 GO:0005524
Pral2213g00006 535 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Pral2213g00006 535 MobiDBLite consensus disorder prediction 20 57 - -
Pral2213g00006 535 MobiDBLite consensus disorder prediction 515 535 - -
Pral2213g00006 535 SMART serkin_6 206 481 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00006 535 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 145 506 IPR047117 -
Pral2213g00006 535 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 181 284 - -
Pral2213g00006 535 MobiDBLite consensus disorder prediction 511 535 - -
Pral2213g00006 535 Gene3D Transferase(Phosphotransferase) domain 1 285 504 - -
Pral2213g00006 535 MobiDBLite consensus disorder prediction 101 126 - -
Pral2213g00006 535 ProSiteProfiles Protein kinase domain profile. 206 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00006 535 FunFam proline-rich receptor-like protein kinase PERK8 285 498 - -
Pral2213g00006 535 CDD STKc_IRAK 212 483 - -
Pral2213g00006 535 Pfam Protein tyrosine and serine/threonine kinase 210 481 IPR001245 GO:0004672|GO:0006468
Pral2213g00006 535 SUPERFAMILY Protein kinase-like (PK-like) 186 481 IPR011009 -
Pral2213g00006 535 MobiDBLite consensus disorder prediction 33 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00006 Pral-Chr2213 143251 152301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00006 101 535 Trihelix Transcription Factor Family AT1G70460 45.968 1.03e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2213g00006 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00006 - - pcin:129289307 473.781