Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00005 ATGTGCTGTTTTGTTTATATGGAGAGCGAGAAGGAACAGAAGGATGAGAGGAAAAGACAACCCCTCTGCACAACCACACCAACCAGGAGGTGCAGGCATGAAACTATAGACTGGGAAACGAGGATGAAGATTGCTATTGGCTCCGCAAAAGGATTGAGATATCTTCATGAAGGCTGCAAACCCAAAATCATACACCCCGACATCAAATCAGCCAACGTTCTTCTTCTTGATGATTTTCAGCCAAAAGTGGGTCTCTCTTGTTACTATACAATTACTAAGGCTGTGTTTGGGTAA 294 0.4354 MCCFVYMESEKEQKDERKRQPLCTTTPTRRCRHETIDWETRMKIAIGSAKGLRYLHEGCKPKIIHPDIKSANVLLLDDFQPKVGLSCYYTITKAVFG 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00005 97 ProSitePatterns Serine/Threonine protein kinases active-site signature. 63 75 IPR008271 GO:0004672|GO:0006468
Pral2213g00005 97 Gene3D Transferase(Phosphotransferase) domain 1 25 93 - -
Pral2213g00005 97 ProSiteProfiles Protein kinase domain profile. 1 97 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00005 97 SUPERFAMILY Protein kinase-like (PK-like) 32 87 IPR011009 -
Pral2213g00005 97 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 33 83 IPR047117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00005 Pral-Chr2213 128228 132524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00005 32 96 Trihelix Transcription Factor Family AT4G32710 50.000 5.03e-18 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral2213g00005 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00005 - - pcin:129289313 84.3445