Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00002 ATGTATTCTTGGGAGCTGCGGCCCCTTACTCTCGTTCTCGTACTCGCTGCTTCGGATCACCTCATTGTCCTTCACGGTCAAGAAGTGCCTCGGTACCAGACGGAGCCGCCGCCGACTCCGTCCAGTTCTTCTAAGTACGGAATAATTGGAGGAAGTGTGTTTCTTTCGGTGATCGTGGTGGGGCTTTGTGCGATTTACTTCAAATGTAGAAAGAGAAGGAGCAGATCACTCAGAGACTCTAGGCAAATCGCTAATGGTGGGAATCTTTTGCCGGTCAACAAGCCACCCTCAAGAAGCCAAGCCAAGCAATTAGCCTCTACTGTGCCTTCTCACGCTCAAGTACAACTAGGAAAAAATGAAGACTTAAGGGGTCGAGACAAGCGATCAGCCAACACTGAGCCCACTCAAACACCACCGGGCAAAAATGAAGACTTAAGGGGCCGAGAGAAGCGATCAGCCAACACTGAGCCCACTCTAACACCACCTGGCAAAAATGAAGAGTTAAGGGGCCGAGAGAAGCGATCAGCCAGCACTGAGCCCACTCCAACCCCACCTGGCAAAAATGAAGACTTAAGGGGCCGAGAGAAGCGATCAGCCAACACTGAGCCCACTCCAACACCACCTGGCAAACATGAAGACTTAAGGGGCCGAGAGAAGCGATCAGCCAACACTGAGCCCACTCCAACACCACCTGGCAAAAATGAAGAGTTAAGGGGCCAAGACAAGCGATCAGCCAACACTGAGCCCACTCTAACACCACCTGGCAAAAATGAAGACTTAAGGGGCCGAGAGAAGCGATCAGCCAACACTGAGCCCACTCCAACACCACCTGGCAAAAATGAGGACTCAAGAGGTCGAGACAAGCGATCAGCTGATACCGAGTGTACTCCAACACCACCAGAACCCAGCCAAATCTTAAATGAGGAAAATCCTTTGCTGGTCAACGAGCCATGTGCAAGAAGAGAAGTCCAGCCATTAGCCCAGCCTGAGCCTTCTCGAGCACAAGGATCCAACCAAACCGCCAATGCTGGAAATCCAGAGTCACAAAGCCGTGGAGCACAGCTAGGTCGATCACGATCTACTCCCAGAGCCTTGGACAGCACAGGCGCACCAAGACTATTTACATATGAGGAATTAGAATTGGCAACAGATGGATTCTCAAAGTCAAAAAAACTCGGCAAAGAGGGCACCGTCTATAAAGGAGTCCTTCCTGATAACAAAATTGTTGCGGTTAAGACGGCAAATTCTAACGTACGGGCAAGGGAGCAGCTCGAGAATGAAATCATGGTCATAAGCCAAGTCCGCCACAGACATATTATTTCCCTCGTTGGTTACTACATTGATGAAGATGAAGCCCGTGGGATGGACATGCTGCTTGTTTATGAGTTCATCCCAAATGGTTCATTACAATCCCACCTGCATGAAAGAGGCCCAGAAACTATGGACTGGGAAACAAGGATGAAGATTGCTATTGGCTCTGCAAAAGGATTGGCATATCTTCATGAAGGCTGTCAACTCACAATCATACACCGTGACATCAAACCACACAACATTCTTCTTCTTGATGATTTTGAGCCAAAGATAGCAGGCTTTGGACTTGCACGACTTTTACCTGAGACTGACAGCCACGTCCTTCTGTCAGAACTCACGGGATCCATTGGATATTTAGCTCCAGAGTGTGCTTCAAGCGGGAGAAGCAGTGAGAAGTCAGATGTCTACGCCTTTGGTGTTGTGCTTCTGGAGTTGATCACAGGACGAAAAGCTCATGATAAGTTAACAGGAAGCTTGGTTGAATGGGCAAGACCTAGACTCCCCGAAGCCTTGAATTCGAGAGGTCGAAAATTAAAGGCTCTTGCTGATCCAAGGTTGCAGAATAATTACGACCGTGAACAGATGTTTCGAATGGTTTCATGTGCTGATAGTTGCATTCGGGAATCAGACAAATGTCGTCCTCAAATGAGCCAGGTGGTTCAAACTTTATCAGACGAAACGACTGGCCTGGATAATGATTTCGCTAAGGAAGCCATCGCACGACGTCAACGCGAGGAAGACGCGGGGACGATGAGAAGGATAGCGCTGGGAACTTAA 2088 0.4895 MYSWELRPLTLVLVLAASDHLIVLHGQEVPRYQTEPPPTPSSSSKYGIIGGSVFLSVIVVGLCAIYFKCRKRRSRSLRDSRQIANGGNLLPVNKPPSRSQAKQLASTVPSHAQVQLGKNEDLRGRDKRSANTEPTQTPPGKNEDLRGREKRSANTEPTLTPPGKNEELRGREKRSASTEPTPTPPGKNEDLRGREKRSANTEPTPTPPGKHEDLRGREKRSANTEPTPTPPGKNEELRGQDKRSANTEPTLTPPGKNEDLRGREKRSANTEPTPTPPGKNEDSRGRDKRSADTECTPTPPEPSQILNEENPLLVNEPCARREVQPLAQPEPSRAQGSNQTANAGNPESQSRGAQLGRSRSTPRALDSTGAPRLFTYEELELATDGFSKSKKLGKEGTVYKGVLPDNKIVAVKTANSNVRAREQLENEIMVISQVRHRHIISLVGYYIDEDEARGMDMLLVYEFIPNGSLQSHLHERGPETMDWETRMKIAIGSAKGLAYLHEGCQLTIIHRDIKPHNILLLDDFEPKIAGFGLARLLPETDSHVLLSELTGSIGYLAPECASSGRSSEKSDVYAFGVVLLELITGRKAHDKLTGSLVEWARPRLPEALNSRGRKLKALADPRLQNNYDREQMFRMVSCADSCIRESDKCRPQMSQVVQTLSDETTGLDNDFAKEAIARRQREEDAGTMRRIALGT 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00002 695 MobiDBLite consensus disorder prediction 330 365 - -
Pral2213g00002 695 FunFam PTI1-like tyrosine-protein kinase 3 464 673 - -
Pral2213g00002 695 MobiDBLite consensus disorder prediction 280 294 - -
Pral2213g00002 695 MobiDBLite consensus disorder prediction 296 310 - -
Pral2213g00002 695 SMART serkin_6 386 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00002 695 ProSitePatterns Serine/Threonine protein kinases active-site signature. 508 520 IPR008271 GO:0004672|GO:0006468
Pral2213g00002 695 Gene3D Transferase(Phosphotransferase) domain 1 464 681 - -
Pral2213g00002 695 Gene3D Phosphorylase Kinase; domain 1 359 463 - -
Pral2213g00002 695 MobiDBLite consensus disorder prediction 76 371 - -
Pral2213g00002 695 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 347 683 IPR047117 -
Pral2213g00002 695 Pfam Protein tyrosine and serine/threonine kinase 393 660 IPR001245 GO:0004672|GO:0006468
Pral2213g00002 695 SUPERFAMILY Protein kinase-like (PK-like) 362 660 IPR011009 -
Pral2213g00002 695 MobiDBLite consensus disorder prediction 80 114 - -
Pral2213g00002 695 MobiDBLite consensus disorder prediction 208 222 - -
Pral2213g00002 695 CDD STKc_IRAK 396 660 - -
Pral2213g00002 695 ProSiteProfiles Protein kinase domain profile. 384 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00002 Pral-Chr2213 42192 66160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00002 337 694 Trihelix Transcription Factor Family AT1G70460 45.013 1.36e-86 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2213g00002 PK_Tyr_Ser-Thr 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00002 - - pcin:129289322 334.724