Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2213g00001 ATGTATTCTTGGGAACTGGGGCTCCTTACTCTCATTCTCGCACTCGCCGCTTCGGATCACCTCATTCTCCTTCACAGTCAAGAAGTGCCTCCTTACCAGACGGAGCCGCTGCCGACTCCGTCCAGTTCTTCTAAGTACGGAGTAATTGTAGCAAGTGGGTTTCTTTTGGTGATCCTGGTGGGGCTTTGTGGGATTTTCTTTTGGTGTAGGAAGAGAAGGACCAGATCATCTGGGTTTTACCCCTCTCCAGAACAACAATCACTCAGAGAATCGATCGAAAATGCCAATGATGGAAATCAATTGCTTGGCGAAAATGAACGCCCAAGAGGCCGAGATGAGCCATCAGCCCCCATTGTGCCTCCTCAGGCACCACTAGAATTAATCCAAAATGCCAATGGTGGAAATCAATTGCCTAGCGAAAATGAACACCCAGGATTTCCATACAAGCCATCAGGTCGCATCGTGCCTCCTCAGGCACCACTAGAATCAATCCAAGATGCCAATAGTGGAAATCAATTGCTTTGCAAAAATGAACAATCAAGATGCCGAGACAAGCCATCAGGTCGCATCGTGCCTCCTCAGGCACCACTAGAATCAATCCAAGATGCCAATGATGAAAATCAATTGCCTGGCAAAAATAAACACTCAAGACACCGAGACAAGCCATCAACCCGCACCGTGCCTCCTCAGGCACCACTAGAATCAATCCAAGATGCCAATGATGAAAATCAATTGCCTGGCAAAAATAAACACTCAAGACACCGAGACAAGCCATCAACCCGCATCGTGCCTCCTCAGGCACCACTAGAATCAATCCAAGATGCCAATGATGAAAATCAATTGCCCGGCAAAAATGAACACTCAAAATGTCGAAACAAGCCATTAGGTCGCATCGTGCCTCCTCAGGCACCACTAGCATCAATCCAAAATATCATTGATGGAAATCAATTGTCTGGCAAAAATGAACACTCAAGAGGTCAAGGCAAGCCATCAGCCTACACCGTGCCTCCTCAAGCACCACTAGCTTTACCATCTTCTTCCAAAGTCTTGGAACTCAAACACATACCAAGAATATTTACCTATGATGAATTACACTCAGCAACGAAAGGATTTGATGATTCAAATTATCTTGGCAAAGGTGGGTTTGGCACCGTCTATAAAGGAGTGCTCCCTTCTAATAATAAAATTGTTGCGATTAAGAAGCTAGAAGCTTGTGCCAGACAAGGAATACAGCAGTTTCTCACTGAAGTGAATGTCATTAGCCAAGCCCATCACAAGCATATTGTTTCCTTGGTTGGATACTATTGCGGTCAAGATGAAGGCCCTATGGCGGCCATGATGCTTGTTTACGAGTTCATCCCAAATAATTCCCTAGCCTACCAGCTGCATAGAACAGGCACAAAAACTATAGACTGGGAAACAAGAATGAAGATTGCTATTGGCTCTGCAAAAGGATTGACATATCTTCATGAAGGCTGTGAACCCAAAATCATACACTGTGACATCAAATCAGCTAACATTCTTCTAACTGATGATTTTCAGACAAAGGTAGCAGATTTTGGACTTGCAAAACTTTTGCCAGACACTGCTACCCACGTCTCTGTGGGAAACTGCATGGGAACCTTTGGATATTTAGCTCCAGAGTGTTTCCGTGGCGGGAAAATGGGTGAGAAGTCGGATGTCTTCGCCTTTGGTGTTGTGCTTTTGGAGTTGATTACAGGACAAAAAGCTTGTGGGTCTTTCTCTGAGGGCATGGTTGAGTGGGTGTGTACAGTATTCATCAATGTTTTCTGTAGTATATAG 1803 0.4493 MYSWELGLLTLILALAASDHLILLHSQEVPPYQTEPLPTPSSSSKYGVIVASGFLLVILVGLCGIFFWCRKRRTRSSGFYPSPEQQSLRESIENANDGNQLLGENERPRGRDEPSAPIVPPQAPLELIQNANGGNQLPSENEHPGFPYKPSGRIVPPQAPLESIQDANSGNQLLCKNEQSRCRDKPSGRIVPPQAPLESIQDANDENQLPGKNKHSRHRDKPSTRTVPPQAPLESIQDANDENQLPGKNKHSRHRDKPSTRIVPPQAPLESIQDANDENQLPGKNEHSKCRNKPLGRIVPPQAPLASIQNIIDGNQLSGKNEHSRGQGKPSAYTVPPQAPLALPSSSKVLELKHIPRIFTYDELHSATKGFDDSNYLGKGGFGTVYKGVLPSNNKIVAIKKLEACARQGIQQFLTEVNVISQAHHKHIVSLVGYYCGQDEGPMAAMMLVYEFIPNNSLAYQLHRTGTKTIDWETRMKIAIGSAKGLTYLHEGCEPKIIHCDIKSANILLTDDFQTKVADFGLAKLLPDTATHVSVGNCMGTFGYLAPECFRGGKMGEKSDVFAFGVVLLELITGQKACGSFSEGMVEWVCTVFINVFCSI 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2213g00001 600 MobiDBLite consensus disorder prediction 98 164 - -
Pral2213g00001 600 FunFam receptor-like protein kinase FERONIA 342 452 - -
Pral2213g00001 600 MobiDBLite consensus disorder prediction 228 243 - -
Pral2213g00001 600 MobiDBLite consensus disorder prediction 178 300 - -
Pral2213g00001 600 MobiDBLite consensus disorder prediction 316 340 - -
Pral2213g00001 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 497 509 IPR008271 GO:0004672|GO:0006468
Pral2213g00001 600 Coils Coil 599 600 - -
Pral2213g00001 600 ProSitePatterns Protein kinases ATP-binding region signature. 377 401 IPR017441 GO:0005524
Pral2213g00001 600 SMART serkin_6 371 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00001 600 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 336 589 IPR047117 -
Pral2213g00001 600 ProSiteProfiles Protein kinase domain profile. 371 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2213g00001 600 FunFam Protein kinase superfamily protein 453 525 - -
Pral2213g00001 600 Gene3D Phosphorylase Kinase; domain 1 356 452 - -
Pral2213g00001 600 SUPERFAMILY Protein kinase-like (PK-like) 348 583 IPR011009 -
Pral2213g00001 600 Gene3D Transferase(Phosphotransferase) domain 1 453 595 - -
Pral2213g00001 600 Pfam Protein tyrosine and serine/threonine kinase 375 578 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2213g00001 Pral-Chr2213 18796 32172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2213g00001 358 589 Trihelix Transcription Factor Family AT1G26150 52.542 4.13e-78 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pral2213g00001 PK_Tyr_Ser-Thr 5.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2213g00001 - - pcin:129289307 278.87