Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2211g00001 ATGGCCACGGACGTAACGGCCGAATTCCAAAACCCTGATTTTCGGCCGGTTCCGCAGCCGCCAGATTTCCATCCGGAGCTCGTCGAGTCACCTCACGATGGGCTCCATTTTTGGCAGTTCATGATCGCTGGCTCCATTGCCGGCGTCGTCGAGCACGTGGCAATGTTCCCCGTCGACACCGTGAAGACCCATATGCAAGCTCTTGGGTCATGCCCCATTAAGTCCGTCAGCGTTCGCCAAGCCCTCCAATCGATTTTGAAGTCTGAGGGTCCATCTGCACTATATCGAGGGATAGGCGCCATGGGTCTTGGTGCTGGGCCAGCACACGCCGTGTATTTTTCCTTTTATGAGGTTTGTAAGAAGTATTTTTCTCATGGGGATCCCAAAAACTCCACTGCCCATGCGATTTCTGGTGTTTGTGCTACTGTTGCGAGCGATGCTGTGTTTACACCCATGGATATGGTGAAGCAGAGATTGCAATTGAGTAACAGTGGTTACAAGGGTGTTTGGGATTGTGTGAAGAGGGTTTTGAGCGAGGAGGGATTAGGGGCTTTTTATGCATCTTATAGGACTACAATTGTGATGAACGCCCCATTTACAGCAGTGCATTTTGCAACTTATGAGGCCGCAAAAAGAGGCCTTAAGGAGATTTCGCCTCAGAGTGCTGATGATGAACGTTTCGTTGTTCACGCAACTGCTGGAGCTGCAGCTGGTGCATTGGCTGCCGCTGTTACCACACCGCTTGATGTGGTCAAAACTCAGTTGCAGTGCCAGGGTGTTTGCGGCTGTGATAGATTCAAGAGTGGTTCAATCGGGGATGTTATTAAAACTATAGTGAAAAAGGATGGGTACAGGGGGCTCATGCGAGGATGGATTCCTAGGATGCTATTCCATGCTCCTGCCGCTGCAATCTGCTGGTCCACATATGAAGCTGGAAAGGGCTTTTTCCAAGAGTTCAATCAAAGACAAGTGAAGTGA 978 0.502 MATDVTAEFQNPDFRPVPQPPDFHPELVESPHDGLHFWQFMIAGSIAGVVEHVAMFPVDTVKTHMQALGSCPIKSVSVRQALQSILKSEGPSALYRGIGAMGLGAGPAHAVYFSFYEVCKKYFSHGDPKNSTAHAISGVCATVASDAVFTPMDMVKQRLQLSNSGYKGVWDCVKRVLSEEGLGAFYASYRTTIVMNAPFTAVHFATYEAAKRGLKEISPQSADDERFVVHATAGAAAGALAAAVTTPLDVVKTQLQCQGVCGCDRFKSGSIGDVIKTIVKKDGYRGLMRGWIPRMLFHAPAAAICWSTYEAGKGFFQEFNQRQVK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2211g00001 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 129 213 IPR018108 -
Pral2211g00001 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 35 122 IPR018108 -
Pral2211g00001 325 Pfam Mitochondrial carrier protein 130 215 IPR018108 -
Pral2211g00001 325 Pfam Mitochondrial carrier protein 225 318 IPR018108 -
Pral2211g00001 325 Pfam Mitochondrial carrier protein 35 125 IPR018108 -
Pral2211g00001 325 Gene3D Mitochondrial carrier domain 131 324 IPR023395 -
Pral2211g00001 325 PANTHER MITOFERRIN-1-RELATED 29 320 - -
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 40 53 IPR002067 GO:0055085
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 53 67 IPR002067 GO:0055085
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 144 162 IPR002067 GO:0055085
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 97 117 IPR002067 GO:0055085
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 186 204 IPR002067 GO:0055085
Pral2211g00001 325 PRINTS Mitochondrial carrier protein signature 234 256 IPR002067 GO:0055085
Pral2211g00001 325 SUPERFAMILY Mitochondrial carrier 33 310 IPR023395 -
Pral2211g00001 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 315 IPR018108 -
Pral2211g00001 325 FunFam Mitochondrial carrier protein, expressed 130 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2211g00001 Pral-Chr2211 16818 19417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2211g00001 1 320 Chloroplast and Mitochondria Gene Families AT2G30160 74.462 9.94e-177 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2211g00001 K15113 - cave:132178554 567