Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral220g00002 ATGATCCCTTCTGAGATCAGAGGAACAAGCCACTACCTAACCCCAGACAAGCCATTCTTAATCCCACAAAACATCACCACCTTTCTTCCCGACACAAACCTTTTCACAAACCTCGACATAACCAACCTCCTTGGGACGACCACAACCCATCATCATCTTCTTCTTCACAGTGAATTTAACAATAATGTTGTTCCTGCTTCTTCTTCAACCTCTGATGAAGCTGAAGAGAAGCAGACAAGCATGATCGATGAGAGGAAACAGAGACGAATGATATCTAACAGAGAGTCAGCTCGAAGGTCGAGGATGAGGAAACAGAGACACATGGATGAGCTGTGGTCGCAGGTGGTTAGACTCAGGACAGAGAACCACAACCTTATTCATAGACTCAACCATGTGTCAGAGTCCCATGACAGGGCTCTTCAGGAGAATGTTAAGCTCAGGGAAGAAGCTTCTGATCTTCGCCAGATGGTTGCAGATCTGCAGATTGGCTCACCTTTTGCCAATACCCTCACGGATTTTGATGACTTCTGA 531 0.4595 MIPSEIRGTSHYLTPDKPFLIPQNITTFLPDTNLFTNLDITNLLGTTTTHHHLLLHSEFNNNVVPASSSTSDEAEEKQTSMIDERKQRRMISNRESARRSRMRKQRHMDELWSQVVRLRTENHNLIHRLNHVSESHDRALQENVKLREEASDLRQMVADLQIGSPFANTLTDFDDF 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral220g00002 176 CDD bZIP_plant_GBF1 86 137 IPR045314 GO:0003700|GO:0006355
Pral220g00002 176 Gene3D - 83 138 - -
Pral220g00002 176 SUPERFAMILY Leucine zipper domain 85 134 IPR046347 GO:0003700|GO:0006355
Pral220g00002 176 MobiDBLite consensus disorder prediction 64 102 - -
Pral220g00002 176 Pfam bZIP transcription factor 85 136 IPR004827 GO:0003700|GO:0006355
Pral220g00002 176 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 88 103 IPR004827 GO:0003700|GO:0006355
Pral220g00002 176 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 11 170 IPR044521 -
Pral220g00002 176 SMART brlzneu 81 145 IPR004827 GO:0003700|GO:0006355
Pral220g00002 176 FunFam BZIP transcription factor 83 134 - -
Pral220g00002 176 MobiDBLite consensus disorder prediction 76 102 - -
Pral220g00002 176 Coils Coil 129 156 - -
Pral220g00002 176 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 83 146 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral220g00002 Pral-Chr220 29438 30115 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral220g00002 36 167 bZIP Transcription Factor Family AT3G30530 56.115 5.48e-46 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral220g00002 bZIP_1 9.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral220g00002 - - pcin:129284626 265.388