Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2204g00003 ATGCCGGCGGTGAGTCAAAAAATGAAGAATCTGTTTACCCACTCAATATTTTGCGGCAGAGGAGATGAGCAAGAGATAGAGCTTGAACACATGTCCAGGGACGAGGGCAGCCATTACAGCCTCGTCGGAGCCCCTCTTCCTTCTCTTGGCGCCAGTGCCGCTCGGACCTATCGCCGACCCAAGCTCCGATCCTGCATCATCTCTCCTTTCAACCCCCGTTACAGATGCTGGCAGACATTTCTGGTCCTTTTAGTTTTCTACACTGCATGGGTTTGCCCCTTTGAATTTGGATTCCTTAATGAATCCAAGGGTCCTCTTGCCATAACAGATAATGTTGTCAACGGCTTTTTTGCCATTGACATTGTTCTGACCTTCTTTGTTGCCTACCTCGACAAAAGTTCTTATCTGTTTATCGACAACCCGAAAATGATTGCACTGAGATACGCCAAAACCTGGCTGTTCTTTGATGTCATCTCTACCATCCCTTTTGAACTTGCTCGTAAAGTACTGCCCACACCTCTTCAGACATATGGCCTCTTCAACATGCTGCGTCTTTGGCGTCTCCGTAGAGTCAGTGCTTTGTTTGCAAGATTGGAAAAGGACAGGAATTTTAATTACATCTGGGTCCGCTGTTCAAAGCTGATATGTGTTACAATGTTCTCAGTGCATTTTGCCGCCTGCTTTTTTTATTTTCTTGCTGCAAATCATGACATAAAAACCACATGGTTTAGCCTAGTTGCTAATGGCGACCAGATGCACCTGTGGGGACACTATGTAACATCAGTTTACTGGGCCTTGGTTACTTTGTCGACCGTTGGTTATGGTGATCTCCATCCTGTGAATACAAAGGAGATGACGTTTGACATTTTCTATATATTCTACATTCTTGGACTCAACTCATATCTTATAGGAAACATGACCAATATGGTTGTCCATCTCACAAGTCGAACGAGGACATATAGAGACACCGTTCAAGCTGCCACAGGTTTTGCACAACGGAACCAGTTACCCGTCCGCTTGCAAGAGCAGATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAGCATCAAGAGGTTATTGATGCTCTTCCAAAAGCGATTCGATCCAGCATATCACACCACCTCTTCTATTCACTTGTCGACAAAGTCTACCTGTTTCATGGCGTGTCCAATGACCTACTTTTTCAACTGGTCACAGAAATGAAAGCTGAGTACTTTCCTCCAAAGGAGGATGTCATTTTACAGAATGAAGCACCGACGGACTTCTATATACTCGTTACGGGTGCAGCTGAACTTATCATCCAAAAGAATGGCATAGAACAGGTTGTTGGTGAGGCAAAGGTAGGAGATGTGGTTGGAGAGATAGGCGTGCTATGTTACAGGCCACAACTAATTACAGTTCGAACCAAACGATTGAGCCAGCTTTTACGTCTGAATCGCACTGCGTTTATAAATCTTGCTCATTCAAATGTTGGAGATGGGACAATAATCATGAGTAATTTTCTTCAGCATTTGAAGGAATCAAGTGATCCAATAATGGAGGGAGTTTTGGCGGAAACAGAGGCGATGCTTGCTCGCGGAAGAATGGATTTGCCTATCAGTCCTTGCTTTGCTGCAAACAGAGACGATGACCTATTGCTGCATCAGTTGCTGAAGAGAGGCTCAGATCCAAATGAAGTTGATAAAAATGGAAGGACATCACTGCATATTGCCGCATCTAGAGGCAACGAACATTGTGTGGTTCTACTTCTTGAATATGGGGCTGATCCTAACAGAAAAGATTTGAATGGAAGTATCCCACTATGGGAAGCAATGTTGGGAGGGCATGAATCGGTCGTAAAACTTCTCATAGACAATGGCGGGGACCTATCCTGTGCGGACGTAGGGCAGATGGCATGCTCTGCTGTGGAGCAAAACAACCTGGAATTGCTCAAAGAAATCATAAGATATGGTGGCGATGTGACGCAGCCCAGAAGCAACGGCACAACAGCACTTCACACGGCTGTATGCGATGGAAACACTGAGATAGTAAAGTTGCTTCTGCAGCAAGGAGCAGATATTGATAAGCCAGACGTTCATGGATGGACCCCCAGGACTTTGGCAGATCATCAAGGGCATGAAGATATCGTAGAGATGTTCCACAACATCCGAGAGGGCAAAAGACCACTTGTTATTCCCACGACAAAGAATGATGCCAAAACCCTCAGGAAGTTCCCAAGTGAACCAGCGACGTGTGCCCGTCAAGAAGTGACTTGGTTGGAGAATCATCCAAGGCCAAGAGCCAACCATTTTCACAATTCTTTCTTTGGCATCATGTCCGCTGCTGCTAACCGTGATCAAGCCCATGCATCATCACAAGGCAATAATGATGTTGCAGAGAACCTGAATGGATTCGCAGCCAGGATAGTTCTGAGTTGTCCAGAGAAAGGGGAACATGGTGGGAAGCTCGTGTTTCTGCCCAAGTCCCTTGAAGAACTGATGGACATGGGTGTGAAAAAGTTCGGCTTTTTGGCCAACAAGATTTTGACCAGAGAAGGAGCTGAGATTGAGGATATAAGGCTTATTAGAGATGGGGATCATCTCATTCTCGCACGTGATGGAGCTCTCGAGTCAATGGCAATACCCCATGAAGAAGGCAGGTAG 2658 0.4556 MPAVSQKMKNLFTHSIFCGRGDEQEIELEHMSRDEGSHYSLVGAPLPSLGASAARTYRRPKLRSCIISPFNPRYRCWQTFLVLLVFYTAWVCPFEFGFLNESKGPLAITDNVVNGFFAIDIVLTFFVAYLDKSSYLFIDNPKMIALRYAKTWLFFDVISTIPFELARKVLPTPLQTYGLFNMLRLWRLRRVSALFARLEKDRNFNYIWVRCSKLICVTMFSVHFAACFFYFLAANHDIKTTWFSLVANGDQMHLWGHYVTSVYWALVTLSTVGYGDLHPVNTKEMTFDIFYIFYILGLNSYLIGNMTNMVVHLTSRTRTYRDTVQAATGFAQRNQLPVRLQEQMLAHLFMKYRTDLEGLQHQEVIDALPKAIRSSISHHLFYSLVDKVYLFHGVSNDLLFQLVTEMKAEYFPPKEDVILQNEAPTDFYILVTGAAELIIQKNGIEQVVGEAKVGDVVGEIGVLCYRPQLITVRTKRLSQLLRLNRTAFINLAHSNVGDGTIIMSNFLQHLKESSDPIMEGVLAETEAMLARGRMDLPISPCFAANRDDDLLLHQLLKRGSDPNEVDKNGRTSLHIAASRGNEHCVVLLLEYGADPNRKDLNGSIPLWEAMLGGHESVVKLLIDNGGDLSCADVGQMACSAVEQNNLELLKEIIRYGGDVTQPRSNGTTALHTAVCDGNTEIVKLLLQQGADIDKPDVHGWTPRTLADHQGHEDIVEMFHNIREGKRPLVIPTTKNDAKTLRKFPSEPATCARQEVTWLENHPRPRANHFHNSFFGIMSAAANRDQAHASSQGNNDVAENLNGFAARIVLSCPEKGEHGGKLVFLPKSLEELMDMGVKKFGFLANKILTREGAEIEDIRLIRDGDHLILARDGALESMAIPHEEGR 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2204g00003 885 SUPERFAMILY Voltage-gated potassium channels 69 311 - -
Pral2204g00003 885 Pfam Ion transport protein 75 317 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral2204g00003 885 CDD CAP_ED 390 495 IPR000595 -
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat region circular profile. 601 632 - -
Pral2204g00003 885 Gene3D Jelly Rolls 355 515 IPR014710 -
Pral2204g00003 885 Gene3D - 538 720 IPR036770 -
Pral2204g00003 885 SUPERFAMILY cAMP-binding domain-like 315 510 IPR018490 -
Pral2204g00003 885 SUPERFAMILY Ankyrin repeat 542 720 IPR036770 -
Pral2204g00003 885 SMART ANK_2a 601 630 IPR002110 GO:0005515
Pral2204g00003 885 SMART ANK_2a 632 661 IPR002110 GO:0005515
Pral2204g00003 885 SMART ANK_2a 665 694 IPR002110 GO:0005515
Pral2204g00003 885 SMART ANK_2a 568 597 IPR002110 GO:0005515
Pral2204g00003 885 SMART ANK_2a 698 728 IPR002110 GO:0005515
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat profile. 601 633 IPR002110 GO:0005515
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat region circular profile. 665 696 - -
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat region circular profile. 568 599 - -
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat profile. 665 697 IPR002110 GO:0005515
Pral2204g00003 885 PANTHER POTASSIUM CHANNEL AKT1 36 870 IPR045319 GO:0005249|GO:0006813
Pral2204g00003 885 Pfam KHA, dimerisation domain of potassium ion channel 806 868 IPR021789 -
Pral2204g00003 885 Pfam Cyclic nucleotide-binding domain 410 494 IPR000595 -
Pral2204g00003 885 FunFam Potassium channel KAT3 76 312 - -
Pral2204g00003 885 PRINTS Ankyrin repeat signature 569 584 IPR002110 GO:0005515
Pral2204g00003 885 PRINTS Ankyrin repeat signature 681 695 IPR002110 GO:0005515
Pral2204g00003 885 Pfam Ankyrin repeats (3 copies) 543 630 IPR002110 GO:0005515
Pral2204g00003 885 Pfam Ankyrin repeats (3 copies) 640 718 IPR002110 GO:0005515
Pral2204g00003 885 ProSiteProfiles KHA domain profile. 806 885 IPR021789 -
Pral2204g00003 885 SMART cnmp_10 390 507 IPR000595 -
Pral2204g00003 885 PRINTS EAG/ELK/ERG potassium channel family signature 87 94 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2204g00003 885 PRINTS EAG/ELK/ERG potassium channel family signature 302 311 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2204g00003 885 PRINTS EAG/ELK/ERG potassium channel family signature 110 120 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2204g00003 885 PRINTS EAG/ELK/ERG potassium channel family signature 121 130 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2204g00003 885 PRINTS EAG/ELK/ERG potassium channel family signature 258 275 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pral2204g00003 885 Gene3D - 76 312 - -
Pral2204g00003 885 FunFam Potassium channel KAT2 378 514 - -
Pral2204g00003 885 ProSiteProfiles cAMP/cGMP binding motif profile. 390 509 IPR000595 -
Pral2204g00003 885 ProSiteProfiles Ankyrin repeat profile. 568 600 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2204g00003 Pral-Chr2204 15524 20587 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2204g00003 22 870 Ion Channels AT4G32500 60.698 0.0 1068
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2204g00003 K21867 - gmx:100802964 1199.11