Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2201g00006 ATGGTTCAAGAACTTCGATGCTTTATTTTGTCACCGAATTTGTTACATATTTCTGTGATCCCCTTTTTCCAGGCAAAGCCTCTTCTTGGAGGGAAGAAGTACGCCCAACTGGTGGATACTAAAATCAGCAGCTCCTACAAAGAAGACCAACTTAAATGGTTGGTCCAAGTAACAGAACAATGTCTCAGAAAGAATCCCAAGGAAAGATCAAGCATGAATGTGGTTGTCTCCGCATTACAAGGCATTGAAGATACTGATGATTTATGTGCAGTTGAAGACTCTTCTGCAGAAAAATCATCTATACAGCTGTCTGTTCCTGATATGACCTGCTCACAAGGTCTCAGAAATGCGTATAAGCAGAATCCGGATGAAGAACAGATCAGCAATATTCACATGATGTATCACATGAAAGATGATCAGATAAGCCAGGACCAGAACTGTACAGAAGGAAGCCTCCAAATAGAAAAGAGGGGCACAAGACTCACAACTTTGAGTAACCAAATTGCAAGAGAAAATAACGATGAAGAACAAACTCAGTGTAGCTTTTGCGGAGATTCATTGGATAATTGCAAAGTCAAAGTCACGTTAAAGGATTCCAAATCTTCTGTATGCTCTGTCTGCAAAAGTAAACGTCCTCATTTTGGGTGGCAAAAGGATTTCTCTTATGATGAACTCCATATGGCTACTGATGGGTTTTCAATTAAGAACTCTCTAACTGAAGGTGTATATGGACCTTCGTTCAGAGGCCAGCTGAAGTGCAATCTGAAAATAGTTATCAAGCAACTTCAAATGACAAGCTCTCAGGAAGAGAAGATATTTAAGTCAGAAGTTCAGTTCCTCTTTAACGCTAGACATGAAAATGTGGTCATGTTGTTGGGTTCATGCATAGATAAAACTAGATTGCTGATTGTATACGACTATGCATGCAATGGTTCGCTTGACCAGCATTTATCAGGACAAAGTTGCAGATCACTGACATGGAGAGAGAGGGTGAAAATAGCAATAGGTTTATCCAGAGGTCTAAAGTATTTGCATGAGAAGAATACAATTCATGGAAGTATAAAACCAAGTAACATTCTTCTAACTCATGATTTTGAAGCGCTGGTAGGAGATTTTGGATTTGGAAAATCCAAAAATGAATTGAAGAATTGGAGCAAGAAGAAAATGGTTGAGAATACTGGATACGAGGCTCCAGAACTTTTGGAGAGTGGAAAATTCTCAACTAAGGCAGATGTGTACTCTCTTGGTGTGGTTCTTTTAGAGCTGATCACCGGGCACAGGGTTATGGATAAAGTTTCAGGGAAGAAAAGTCTTATTGACTGGGCAAAGCCACTTCTCAGAGGAAGGACTTACCCACAATTGGTGGATCCAAAAATCGGCAGCTCCTACGATGATCAAGAGCTTTTTTCATTGGTCCAAGTTATGCCG 1428 0.4006 MVQELRCFILSPNLLHISVIPFFQAKPLLGGKKYAQLVDTKISSSYKEDQLKWLVQVTEQCLRKNPKERSSMNVVVSALQGIEDTDDLCAVEDSSAEKSSIQLSVPDMTCSQGLRNAYKQNPDEEQISNIHMMYHMKDDQISQDQNCTEGSLQIEKRGTRLTTLSNQIARENNDEEQTQCSFCGDSLDNCKVKVTLKDSKSSVCSVCKSKRPHFGWQKDFSYDELHMATDGFSIKNSLTEGVYGPSFRGQLKCNLKIVIKQLQMTSSQEEKIFKSEVQFLFNARHENVVMLLGSCIDKTRLLIVYDYACNGSLDQHLSGQSCRSLTWRERVKIAIGLSRGLKYLHEKNTIHGSIKPSNILLTHDFEALVGDFGFGKSKNELKNWSKKKMVENTGYEAPELLESGKFSTKADVYSLGVVLLELITGHRVMDKVSGKKSLIDWAKPLLRGRTYPQLVDPKIGSSYDDQELFSLVQVMP 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2201g00006 476 Gene3D Transferase(Phosphotransferase) domain 1 309 476 - -
Pral2201g00006 476 Gene3D Transferase(Phosphotransferase) domain 1 15 103 - -
Pral2201g00006 476 Pfam Protein tyrosine and serine/threonine kinase 234 433 IPR001245 GO:0004672|GO:0006468
Pral2201g00006 476 PANTHER OS01G0253100 PROTEIN 25 85 - -
Pral2201g00006 476 Gene3D Phosphorylase Kinase; domain 1 204 307 - -
Pral2201g00006 476 FunFam Proline-rich receptor-like protein kinase PERK8 194 307 - -
Pral2201g00006 476 SUPERFAMILY Protein kinase-like (PK-like) 214 475 IPR011009 -
Pral2201g00006 476 ProSiteProfiles Protein kinase domain profile. 232 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2201g00006 Pral-Chr2201 36500 41228 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2201g00006 220 474 Trihelix Transcription Factor Family AT5G38560 43.609 8.81e-64 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Pral2201g00006 PK_Tyr_Ser-Thr 4.5e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2201g00006 - - pcin:129302218 685.256