Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2201g00001 ATGACAAAGTTGAAATCTATCGTATTGAAAAAGTCTCTCAATTTGATCGAAACTCCAGACTTCTCAGGTGCTCCAAATTTAGAACATTTACATCTTGGTGGATGCACATCTCTTGTCAAGGTTCATCCCTCCCTTGGACAGTTGGAAAAGCTTGTTGAGGTGGACTTGAATCATTGTGCAAACCTTGAAATCCTACCAAAAAAATTGGAAACAAATTCTTTGGTGAAGTTAAACCTTAGGGGGTGTAAAAAAGTTGCAAAGCTCCCAGAGTTTGGGGAAGGTATGAAAAAACGATCATATCTTAATGTGGATGCTACTTCTATAACTAGACTTCCTGAATCAATTGGATCCTTGACGGCTCTTGAATATTTAAATTTGAGTGGCTGTAAAATTGAAAACCTTGACAAGTTATTGAAGACTCACATAAGTCACCAAATTTCCGGCTGGAATGTAACGTCCTTAACAGAGTTATATTTAAGCCAGTGTGGCTTAGATGATGGATCGATTCCTGATTTTGACAGTTTATCATTGCTCACTGTATTGGATCTAAGCTTTAATGATTTTGAGAATCTACCCATTGGTTGCTTCTCTGGTCTTTCTCGACTTGTCTTCCTTTCATTGAATTACTGCAAAAGGCTTAAGTCGTTGCCAACGCTCCCACCACGATTAATTCGATTACATGCCTCCGGTTGTGATTTAATGGAACCATTATCATCAGATAGACAATTATGGGATTTGGTTGCTTCACTTGACCATGAGTGTCGTGGGCGAACTATCGATGATGATTGGGATGAAGATGGGCTGGAAGATGTTCCTTCTGTGCTATATCAGAGACTTAAATGGCCTTCCAGAGATTTCTGTGCAAGTCTTCCAGGATACAAAATACCATCATGGTTTCTAAAGAGAGAATATTGCCCTTTGGATGAGAATAGGGAATATAAGATTGAAGTGGACATACCTCCATATTTTCGTGACAGTGAATGGTGCGGAATTGTTGTGTGCTTCCGTATGTCAAGTTACAATGATGGTTCTGGGGTCGTTGGTTGGGGTAGTAAAGCTGCAGAAAGTGATGATTATTATATAATCAAAGAGTGGGAGCGTGCTATTCCTTATCCCTTTCGCGGAGAGCAGTGCATAATAATGGTGTTGGAATTAAATGAGGAAACATGTTGGCGGCACCTAAGAGCTCATCAGAGCAATTCCCTTCACATTCTATTTGCTTTTGAATCTAAATGGTTTGATCAAGATTATTGGGAAGCAGAGGAATGTGGGTGGAGAGTGATACGTAAAGAAGAGATACAAGATTGGCGCCATCTAAATGGTTTCTTCAACCAAGCCAACCAACCCAAGCTTGCTTCTTCTGATGAGGTCAAGCTTCCGATGAGAGCACTTGTAGAGTTCTTTTTGGGGGAGTGGTTTTGA 1422 0.4023 MTKLKSIVLKKSLNLIETPDFSGAPNLEHLHLGGCTSLVKVHPSLGQLEKLVEVDLNHCANLEILPKKLETNSLVKLNLRGCKKVAKLPEFGEGMKKRSYLNVDATSITRLPESIGSLTALEYLNLSGCKIENLDKLLKTHISHQISGWNVTSLTELYLSQCGLDDGSIPDFDSLSLLTVLDLSFNDFENLPIGCFSGLSRLVFLSLNYCKRLKSLPTLPPRLIRLHASGCDLMEPLSSDRQLWDLVASLDHECRGRTIDDDWDEDGLEDVPSVLYQRLKWPSRDFCASLPGYKIPSWFLKREYCPLDENREYKIEVDIPPYFRDSEWCGIVVCFRMSSYNDGSGVVGWGSKAAESDDYYIIKEWERAIPYPFRGEQCIIMVLELNEETCWRHLRAHQSNSLHILFAFESKWFDQDYWEAEECGWRVIRKEEIQDWRHLNGFFNQANQPKLASSDEVKLPMRALVEFFLGEWF 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2201g00001 473 SMART LRR_typ_2 175 198 IPR003591 -
Pral2201g00001 473 SMART LRR_typ_2 118 141 IPR003591 -
Pral2201g00001 473 ProSiteProfiles Leucine-rich repeat profile. 120 141 IPR001611 GO:0005515
Pral2201g00001 473 PANTHER LEUCINE-RICH REPEAT-CONTAINING 100 249 - -
Pral2201g00001 473 Gene3D Ribonuclease Inhibitor 1 95 IPR032675 -
Pral2201g00001 473 SUPERFAMILY L domain-like 1 238 - -
Pral2201g00001 473 Pfam Leucine Rich Repeat 178 199 IPR001611 GO:0005515
Pral2201g00001 473 Pfam Leucine Rich Repeat 153 175 IPR001611 GO:0005515
Pral2201g00001 473 Gene3D Ribonuclease Inhibitor 96 249 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2201g00001 Pral-Chr2201 82 1717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2201g00001 1 292 WRKY Transcription Factor Family AT4G12020 30.640 6.68e-17 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2201g00001 - - pcin:129303275 442.195