Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2200g00020 ATGCTCCAGGCGCTTCTCAAGCATTTTCCGTTTGAGCGAAACCCCACCTTGTACGTCTCTCTCTTCTGCTTCATCATCCTCATCTCTGTGCTTATCAAACTACATAGAACCACAAGAAATGAGCCCAATCTTCCTCCATCCCCACCTAAATTTCCATTTATAGGCAATCTTCATCAGCTTGGTACTCTGCCTCACCGTTCCCTCACAGCTCTCTCCCACAAGTATGGCCCTCTCATGTTGCTCCGATTCGGTCAAACCCAAACTCTGGTGGTTTCTTCCGCGCACTTGGCCAGAGAAATAGCAAAATCCCACGACGTCGTTTTCTCCGATCGGCCTCAAACCACCGCTGCAAAAATACTTCTCTATGGATGCAAAGATGTGGGTTTCTTACCCTATGGTGAAGAGTGGATGCTCAAGAGGAAAATCTGTGTTCTTGAGCTTCTCAGCCTCAAAAGAGTTCAGTCCTTTCAGTACATCAGGGAGGAGGAAGCTGCGCACTTGGTGGCTAAGATTCGTCAAGCATGTGGTCAGCTTAATGATAGTTTGTCCGTGAATATGTCTCAGATGATTATTGCAACTTCAAACAATATTGTGAGCAGATGTCTTCTTGGACAGAAGTTTGATGCAGCGGATGGTAAAAGCAGTTTTGGGGAAGTAGCGAGGAAAGTGATGGTTCAAATGGCAGCTTTCAGTTTCGGAAACTTCTTCCCCTCGTTGAGATGGATGGATGTTGTTACCGGATTGATTCCAAAGCTGAATGCTACGTTCAGAGAATTGGATGCTTTCTTCGACGATGTGCTCGCTCAACATAAAGCATCTGGAAGGAGTGAATCAGATGAAGATCACAAGTCAGAAAAGAAAGACTTTGTTGATATTCTCCATCAACTTCAACAAGACGATCTGCTAGACTTCCATCTTACCCAATGGGACCTCAAAGCCATGATAATCGATTTGTTCGTTGGAGGAAGTGACACTACTTCAACAGCTCTGGAATGGGCCTTTGCAGAGCTCATGAAGAATCCAAGGGCAATGAAGAAAGCACAGCAAGAGGTGAGAAGAGTGATGGGGAATAAGTCAAAAGTGGAAGAAAATGATGTGAAACAAATGAAGTACTTGGAATGTGTACTTAAAGAAACTTTAAGATTACATCCTCCCGTCGCACTTTCGGTTCCAAGAGAGACAACTTCGGGTGTGACGTTGGGAGGGTACTATATTCCTCCAAAAACAACTGTATTTGTGAATGCATGGGGAATTCAGAGAGATCCTGAATTCTGGGAAAGACCGGACGAGTTTGAACCGGAGAGATTTGAGAACAACCAAATTGAGTTCAAAGGTCAAGACTTTGAATTTGTTCCTTTTGGTATTGGAAGGAGGGGATGCCCAGGAATTTCATTTGGGCTTGCATCACTTGGGTACGTGTTAGCTAATCTTTTGTGTTGGTTCGATTGGAAGCTTCCTGAATCTGGTAAATTTGCTGATCATGGCATGGACATGAAAGAGACATTTGGGCTTACCGTCGTTAAGAAACTACCAATTTTTGTCCAACCAATACCGTACCATGCCTTATAG 1569 0.4417 MLQALLKHFPFERNPTLYVSLFCFIILISVLIKLHRTTRNEPNLPPSPPKFPFIGNLHQLGTLPHRSLTALSHKYGPLMLLRFGQTQTLVVSSAHLAREIAKSHDVVFSDRPQTTAAKILLYGCKDVGFLPYGEEWMLKRKICVLELLSLKRVQSFQYIREEEAAHLVAKIRQACGQLNDSLSVNMSQMIIATSNNIVSRCLLGQKFDAADGKSSFGEVARKVMVQMAAFSFGNFFPSLRWMDVVTGLIPKLNATFRELDAFFDDVLAQHKASGRSESDEDHKSEKKDFVDILHQLQQDDLLDFHLTQWDLKAMIIDLFVGGSDTTSTALEWAFAELMKNPRAMKKAQQEVRRVMGNKSKVEENDVKQMKYLECVLKETLRLHPPVALSVPRETTSGVTLGGYYIPPKTTVFVNAWGIQRDPEFWERPDEFEPERFENNQIEFKGQDFEFVPFGIGRRGCPGISFGLASLGYVLANLLCWFDWKLPESGKFADHGMDMKETFGLTVVKKLPIFVQPIPYHAL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2200g00020 522 Gene3D Cytochrome P450 29 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 SUPERFAMILY Cytochrome P450 45 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Pral2200g00020 522 CDD CYP71-like 74 511 - -
Pral2200g00020 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 193 211 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 330 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS E-class P450 group I signature 310 327 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PANTHER CYTOCHROME P450 71B11-RELATED 28 516 - -
Pral2200g00020 522 Pfam Cytochrome P450 45 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 Coils Coil 344 364 - -
Pral2200g00020 522 FunFam Cytochrome P450 83B1 31 515 - -
Pral2200g00020 522 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS P450 superfamily signature 321 338 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2200g00020 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2200g00020 Pral-Chr2200 123509 125421 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2200g00020 43 513 Cytochrome P450 AT3G48270 42.283 2.15e-137 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2200g00020 K20617 - qsa:O6P43_022633 625.165