Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2200g00011 ATGCCGCAGGATTCGTCTGAACAAGATGATGCTGATTCTGAGTTCGTAGAGATTGACCCCACACGTCGATATGGTCGGTACAAGGAGGTTTTGGGGCAGGGGGCTTTCAAGAAGGTATACAGAGCATTTGATGAGTTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGGCAGATCTGTTGCGTAACAATGAAGATTTGGAGCGCCTATATTCAGAAGTGCATTTGCTGAAGACGTTGAAGCACAAGAATATAATCAAGTTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAATTTCATCACTGAAATTTTCACTTCTGGAACCTTACGCCAATATCGGCAGAAACATAAGCATGTTGACTTGAGAGCGTTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGTGAGGTTAAAATTGGTGACTTGGGATTGGCTGCCATACTTCAACAAGCGAATTCAGCTCACAGTGTTATAGGTACTCCGGAGTTTATGGCTCCTGAACTTTATGAAGAGGAATACAATGAACTTGTTGACATCTATGCTTTTGGCATGTGTTTGCTGGAGTTGGTGACTGTCGAGTATCCATATGTTGAATGTGCTAATGCTGCTCAAATATATAAGAAAGTGATATCTGGAATCAAGCCGGCATCATTGGCAAAAGTGAAAGACCCTCAAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTTTCGGAGCGGTTGCCTGCAAAGGAACTCTTAATGGATTCCTTTCTTCTTCCAGATGATGAAAGTGACAGTGTAGGTCGTTCTTTAAAGTCCAGAGCCCATGATTTAGGACATAGTGATCAACATGTTATTGGTAAACATCTTGAAGAAACTTCTGCTGAGATAGGTAGGGAATTCAGAGTAGAAGGTCAAAGGAGAGATGTCAATACTATATTTTTAAAGCTGAGAATAGCTGACTCCTCAGGTCATATTCGCAACATCCACTTCCCTTTTGATGTTGAAGCAGACACTGCGATTGCCGTTGCTAGTGAAATGGTTGAGGAGTTGGAACTCACGGATCAAGATGTTACAAATATTGCTGAGATGATTGACACGGAAATTCGCTATCTCATTCCAGACTGGAATCCTAATGAAACTCCTACTGCTGATAGCACTGGTCAGGAATTAGCAGTTCCAGGTGGCCATGCCTCTGAAACTAAGGATGAGGCTTCTCCACATGGAAATAATTCTATAGCTTCTACTGGTGGTCTTTCATTCGAACGATTACGTTCAGGTCGTAACTACTGGTCTGACTCACCTAAGACAGGTAGAAACTCTCCACTGGGGCCTGGTGCTTCAAAATTGTCTAGCCAAGCGGATTCAAACACTGCAGGAACCTCAACTGCATATGCAGGGACTTCAACCGAGCAGCAGGATGGCAACTGCAGTTGTGATGGTGATAATAGTGTAGAAAAGAAATCTAGTGGGACTACTGATTCCCATTCCAGTAAGAGAAGCATTGCATCTGGGGATTTACAGTTAACCGATGGAGAGTCTCCTTTGGTAGAAAAACCGATAGAATTGAAAGATGATGAATTAGAAGATGTCAACATAATTGCTGCAAAATTTGAACAATTATTGCTAAAGCAACGACAAGAATTTGATGAACTAAAGAGGAAGCATGAATTAGATGTCTTGGATTTTTTGAATGAACTTCCTATAGAAACTCAACGTAAGGTCTTAAATACATGCCATCAGGAATACAACAATGGAATTGTACGGTAA 1845 0.4081 MPQDSSEQDDADSEFVEIDPTRRYGRYKEVLGQGAFKKVYRAFDELEGIEVAWNQVKVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRQKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYVECANAAQIYKKVISGIKPASLAKVKDPQVKAFIEKCIANVSERLPAKELLMDSFLLPDDESDSVGRSLKSRAHDLGHSDQHVIGKHLEETSAEIGREFRVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFDVEADTAIAVASEMVEELELTDQDVTNIAEMIDTEIRYLIPDWNPNETPTADSTGQELAVPGGHASETKDEASPHGNNSIASTGGLSFERLRSGRNYWSDSPKTGRNSPLGPGASKLSSQADSNTAGTSTAYAGTSTEQQDGNCSCDGDNSVEKKSSGTTDSHSSKRSIASGDLQLTDGESPLVEKPIELKDDELEDVNIIAAKFEQLLLKQRQEFDELKRKHELDVLDFLNELPIETQRKVLNTCHQEYNNGIVR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2200g00011 614 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2200g00011 614 FunFam Probable serine/threonine-protein kinase WNK1 9 106 - -
Pral2200g00011 614 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Pral2200g00011 614 MobiDBLite consensus disorder prediction 430 444 - -
Pral2200g00011 614 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Pral2200g00011 614 MobiDBLite consensus disorder prediction 401 539 - -
Pral2200g00011 614 Gene3D - 336 430 - -
Pral2200g00011 614 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2200g00011 614 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 585 - -
Pral2200g00011 614 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 340 394 IPR024678 GO:0004674|GO:0005524
Pral2200g00011 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Pral2200g00011 614 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Pral2200g00011 614 MobiDBLite consensus disorder prediction 455 511 - -
Pral2200g00011 614 FunFam Probable serine/threonine-protein kinase WNK3 336 431 - -
Pral2200g00011 614 CDD STKc_WNK 23 283 - -
Pral2200g00011 614 Coils Coil 560 580 - -
Pral2200g00011 614 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2200g00011 614 SUPERFAMILY Protein kinase-like (PK-like) 18 282 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2200g00011 Pral-Chr2200 60569 65025 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2200g00011 13 401 MAP Kinase Kinase Kinase AT3G22420 53.741 7.30e-162 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral2200g00011 Pkinase 3.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2200g00011 K08867 - qsa:O6P43_030822 786.563