Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2200g00002 ATGGAATTGGAAGGAACAGATGAACTGCGCCCTTTTTTCGGTTTTCAAGGTCCAACTTCTAAACTCCACACTCCTCCTCGACTTTCCGGTGATACACTTGTTTTCCGCGGGCGAACCTTGCGAATCATGGACTCCAAACACACTCCCACTCTTAAATTCCTCTGCAGCTACGGCGGCAGGATTCTTCCCCGTTCTACCGACGGGAACCTCCGTTACGTCGGCGGCCACACCAGAGTCCTCTCTGTTGATCCTTCCATATCCTTTTCAGACCTCATGGTAAAGCTTGTAGAGTTCTGTGGTTCGTCCGTAACCTTGAAGTGTTCATTGCCCAGCGGCGACCTCGAGACGTTGATTTCCATTACTAACGATGAGGATTTGGCCATTATTATCCAGGAATATAAGCGAGCCTCCTCGGCTAAGGCTCACCCGTTGAAGATCAGAGCCATTCTTTCGCCGCCCAGGTCTCTCAAGAAAGTATCTCCTGCTTCGTCTTCGCGATCGAGCGCCGAACTCTCTTCAACTGGATCGGCTCACTCCTCCAATGAATCGTTGCCGTATTCCCCTGTATATCGTGTTCTCCGTCCGGTCACGTATCCGGTAGGATTCCGTTACGGGTCGGGAAAAGCTTGCTGCTATTCCGGCCAAGTCGACAGAAGCTTTCGATTCTTAAACCGGAAACCTAGCTGCCCCAATTTCTGCCACTGA 705 0.5121 MELEGTDELRPFFGFQGPTSKLHTPPRLSGDTLVFRGRTLRIMDSKHTPTLKFLCSYGGRILPRSTDGNLRYVGGHTRVLSVDPSISFSDLMVKLVEFCGSSVTLKCSLPSGDLETLISITNDEDLAIIIQEYKRASSAKAHPLKIRAILSPPRSLKKVSPASSSRSSAELSSTGSAHSSNESLPYSPVYRVLRPVTYPVGFRYGSGKACCYSGQVDRSFRFLNRKPSCPNFCH 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2200g00002 234 Gene3D - 71 150 - -
Pral2200g00002 234 PANTHER OS05G0427100 PROTEIN-RELATED 43 168 - -
Pral2200g00002 234 SUPERFAMILY CAD & PB1 domains 67 157 - -
Pral2200g00002 234 CDD PB1_UP2 54 150 - -
Pral2200g00002 234 MobiDBLite consensus disorder prediction 156 183 - -
Pral2200g00002 234 MobiDBLite consensus disorder prediction 157 183 - -
Pral2200g00002 234 Pfam PB1 domain 67 143 IPR000270 GO:0005515
Pral2200g00002 234 SMART PB1_new 65 153 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2200g00002 Pral-Chr2200 7589 11818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2200g00002 51 152 MAP Kinase Kinase Kinase AT1G04700 47.059 5.06e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2200g00002 - - qsa:O6P43_022662 224.557