Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2195g00001 ATGAAGCTCAAACCGGGATGTCCCCATCTTCTGCTTTCCCTCCTCCTCCTTGGCTCCACTTCAATCTTCATGTTCCTCCCACGGATCGCTTTCGCTGCCACACCCAAGCTCACCATTGATGAAGTGAGGGCATTGAAAGAGATAGGGAAGAAGCTGGGGAAGAAGGAGTGGGACTTTGGTATAGATCCCTGCAGTGGCAAAGGCAGATGGAATGTGACAGATGAGAGGAAAGGCTTTGGCTCTGCCAGCTGTGTTATCTGTGATTGCTCCTTCAATCTCAATTCATCTTGCCATGTTGTAAGCATACTTTTTAAGGCTCAGAATATTTCCGGTACTCTTCCACCAGAGTTTTCCAAGCTTCAGCATCTCAAGCAATTGGACCTTGGTCGTAATCTCTTCACTGGTTCTATACCTCAGCAATGGGCTGCTTTGCACTTGGACCAGCTCAATCTCATGGGGAACAAGTTATCAGGTCCTTTTCCTAAAGTTCTCACCAATATCACAACCCTCAGAAACCTGAGTATTGAAGGGAACCTATTTTCAGGCCACATTCCTCCAGAGATTGGAAACTTGGTCAATTTAGAAAAAATCATTCTGTCATCAAATGCATTGACTGGAGAATTGCCACCCGCACTTTCAAAGTTGACCAAGTTGACCGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCCGATTTCATTAGCAAATTGACATCTATTGAGAAGCTGCACATTGAGGGTTGCTCGCTCGAGGGACCCATACCTTCCACCATTTCTGCCTTGAGAAGATTAAGTGATTTGAGGATAACTGATCTGAAAGGTAGAAGCTCATCTTTCCCATCATTGGGCTATATGAAATCATTGAGGACCCTTATACTGAGGAGATGCTTGATCAAAGGAAAAATCCCCTACTCTATTGGGAATATGAACAAACTGAAGATCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGATACCTGGCTCTTTTGACCAGCTCGACAAAGTAGACTTCATATATCTTACTGGGAACAAGCTAACAGGGACAATACCGAGCTGGGTTCTTGGAAGAAATACAAATGTTGATATTTCTGACAATAACTTTAGCTGGGACAGCTCGAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTATTCTTCTTCTGTGGATAAACAAAAAAATGTTCACTCGTGCTTGAAAAAGAACTTTCCATGCTCACATTCGGACAGCCGATACCACTCCTTGCACATTAACTGCGGTGGCAAGGAAGAAAATATCAATGGTACTATTTATGAAAGGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTATGGCCGGAATTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATAATATTGAATCTGATCCCTATATTGTGACCAACACTTCCAAACTTCTCCGTGTCTCGGCTCCCACTTCAGAACTATACAGGACAGCTCGTTTGTCTCCCCTTTCTCTCACTTACTATGGACTCTGTCTAATGAATGGAAACTACACTGTTAGGCTTCACTTCGCAGAGATTGTGTTTGTCAATGATAGATCATTTTACAGTCTTGGGAGACGTGTATTTAACGTCTATATCCAGGGGAAGTTGGTCCTAGAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCCAATTGTGAAGACATTTAATGCCACTGTCACGCAACATTCTTTGAAGATTCACTTCTACTATGCTGGAAAGGGGACGACTGGCATACCGACCAGAGGGATTTATGGACCTCTGATATCTGCCATATCTGTAGATCCTAATTTTAAACCTCCATCACCACGGATTGGAAAGAGAACGTATATTATAGTGGTAGCTGCTATGTTAGCTGCTCTTGTGCTTCTTCTGATGCTCCTAGGTATTATGAGGTGGAAGGGCTGGTTAGGAGGTGAAGACTCCGTGTATAAAGAGCTGAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGACAAATCAAAACAGCAACCGAAAACTTTGATGCTACAAACAAACTTGGAGAAGGCGGCTTTGGTTCTGTTTACAAGGGTCTGCTATCCGATGGCACTGTAATTGCAGTAAAACAACTCTCCTCAAAATCCAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAATTGATACTGGTATATGAGTATATGGAAAATAATTGTCTATCACGTGCACTTTTTGGAAAAGATCCAGCCTGCAAAGCAAAACTAGACTGGACAACGCGGACGAAAATTTGCCTTGGTATAGCTAGAGCTTTGGCTTATCTGCATGAAGAGTCCAGAATAAAAATCATACACAGGGATATAAAGACTAGTAATGTTTTGCTAGATAAAGATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTAATGAAGAAGGTGATAATACACATATCAGCACTCGAGTTGCTGGAACCATTGGTTACATGGCTCCTGAATATGCAATGCGTGGCTGTTTGACTGACAAAGCAGATATTTATAGCTTTGGGGTGGTTATATTGGAAACTATCAGTGGAAAGAGCAATACAAATTATAGACCCAATGAAGAATTCGTTTACCTTCTTGATTGGGCCAATGTTCTGCAAGAGAGAGGAAATCTACTGGAGCTGGTTGATCCAGACTTAGGATCAGACTATTCAACTGAGGAGGCCATGGTTATGCTAAATGTGGCTCTCTTGTGTACCAATGCATCCCCAACACTTAGGCCAAAAATGTCCCAAGTTGTGAGCATGCTTGAAGGCCAAACAGATATTCAGGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGAAATCACTTCTGGCAGAACCCAGATACTGATTCCTCTAGTTCATAA 2988 0.424 MKLKPGCPHLLLSLLLLGSTSIFMFLPRIAFAATPKLTIDEVRALKEIGKKLGKKEWDFGIDPCSGKGRWNVTDERKGFGSASCVICDCSFNLNSSCHVVSILFKAQNISGTLPPEFSKLQHLKQLDLGRNLFTGSIPQQWAALHLDQLNLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGHIPPEIGNLVNLEKIILSSNALTGELPPALSKLTKLTDLRISDNNFSGRIPDFISKLTSIEKLHIEGCSLEGPIPSTISALRRLSDLRITDLKGRSSSFPSLGYMKSLRTLILRRCLIKGKIPYSIGNMNKLKILDLSFNDLTGRIPGSFDQLDKVDFIYLTGNKLTGTIPSWVLGRNTNVDISDNNFSWDSSSPVECPRGSVNLVESYSSSVDKQKNVHSCLKKNFPCSHSDSRYHSLHINCGGKEENINGTIYERDREQRGASMFYYGRNWALSSTGNFMDNNIESDPYIVTNTSKLLRVSAPTSELYRTARLSPLSLTYYGLCLMNGNYTVRLHFAEIVFVNDRSFYSLGRRVFNVYIQGKLVLEDFNIEKEAGGTGKPIVKTFNATVTQHSLKIHFYYAGKGTTGIPTRGIYGPLISAISVDPNFKPPSPRIGKRTYIIVVAAMLAALVLLLMLLGIMRWKGWLGGEDSVYKELRGIDLQTGLFTLRQIKTATENFDATNKLGEGGFGSVYKGLLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILVYEYMENNCLSRALFGKDPACKAKLDWTTRTKICLGIARALAYLHEESRIKIIHRDIKTSNVLLDKDFNAKVSDFGLAKLNEEGDNTHISTRVAGTIGYMAPEYAMRGCLTDKADIYSFGVVILETISGKSNTNYRPNEEFVYLLDWANVLQERGNLLELVDPDLGSDYSTEEAMVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSS 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2195g00001 995 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 239 386 - -
Pral2195g00001 995 SUPERFAMILY Protein kinase-like (PK-like) 667 957 IPR011009 -
Pral2195g00001 995 SUPERFAMILY L domain-like 86 371 - -
Pral2195g00001 995 Gene3D Ribonuclease Inhibitor 50 167 IPR032675 -
Pral2195g00001 995 Gene3D Ribonuclease Inhibitor 168 237 IPR032675 -
Pral2195g00001 995 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 418 610 - -
Pral2195g00001 995 FunFam Putative LRR receptor-like serine/threonine-protein kinase 758 967 - -
Pral2195g00001 995 SMART serkin_6 682 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2195g00001 995 Pfam Malectin domain 420 605 IPR021720 -
Pral2195g00001 995 ProSitePatterns Serine/Threonine protein kinases active-site signature. 805 817 IPR008271 GO:0004672|GO:0006468
Pral2195g00001 995 Gene3D - 419 609 - -
Pral2195g00001 995 ProSitePatterns Protein kinases ATP-binding region signature. 688 710 IPR017441 GO:0005524
Pral2195g00001 995 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 652 757 - -
Pral2195g00001 995 Gene3D Transferase(Phosphotransferase) domain 1 758 967 - -
Pral2195g00001 995 CDD STKc_IRAK 688 957 - -
Pral2195g00001 995 Pfam Protein tyrosine and serine/threonine kinase 685 954 IPR001245 GO:0004672|GO:0006468
Pral2195g00001 995 Gene3D Ribonuclease Inhibitor 238 404 IPR032675 -
Pral2195g00001 995 Gene3D Phosphorylase Kinase; domain 1 654 757 - -
Pral2195g00001 995 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 26 990 - -
Pral2195g00001 995 ProSiteProfiles Protein kinase domain profile. 682 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2195g00001 995 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 43 208 - -
Pral2195g00001 995 Pfam Leucine rich repeat 289 348 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2195g00001 Pral-Chr2195 13038 25207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2195g00001 221 987 Receptor kinase-like Gene Family AT1G07650 65.245 0.0 1001
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral2195g00001 PK_Tyr_Ser-Thr 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2195g00001 - - gmx:100784864 1519.98