Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2190g00011 ATGGGTTGCATTAACTCTAAGAAGGCCATTGCCGGAGCTTCACCTGAATATGTGCGTTCGGTATCGGTAACCACCGATAAGAGGTCGTCTGTTGCGGAGCCTCCATCCAGAGTCCGATCTGGGGCTCTGAATTTTGGGACCAAAGCGGAACAACCATCGGAGGATCGGATACAGGATGGGAAACGATTTAAGAGGAACAGTTCTCAAGGTACTGGCTCTTTAAGAATTTCGCATAGATTCGTGGAAGCGGAGCAGAATGCCGCCGGATGGCCCCCTTGGCTCACCTCTGTTGCAGGGGAAGCTATCCAAGGATGGGTGCCTCTCAAGGCAGATTCATTTGAGAAATTAGACAAGATCGGACAAGGGACATATAGCAGTGTGTTCCGGGCACGGGAGGTTGAAACCGGGAGGATGGTTGCCCTGAAGAAGGTACATATTGAGAATTTTCATCCTGAGAGCATTAGATTCATGGCGAGAGAAATAGCAATCCTACGTAAGCTTGATCACCCAAACGTCATGAAATTGGAGGGTATAATCACATCACGACTATCAAGTAGCATATACCTTGTATTTGAATACATGGAACACGATCTTGCAGGCCTGGTATCCTCTCCCGACGTCAAGTTCAGTGAGACTCAGGTTAAATGTTACATGAGGCAGTTATTAAGTGGACTTGAACACTGCCACATCCATGGCGTTATGCACCGGGATATCAAAACATCCAATATATTGGTAAACAATGAGGGGGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTAACAACAAGCATCCGTTGACCAGCTGTGTAGTGACTCTATGGTATCGTCCTCCTGAACTTTTGATGGGATCAACAAACTATGGAGTATCGGTGGATCTATGGAGCGTGGGCTGTGTATTTGCAGAACTCTTTCTGGGGAAGCCTCTTCTAAAGGGGAGAACTGAAGTTGAACAATTACACAAAATATTTAAACTTTGTGGCTCTCCACCTGATGAATATTGGAAAAAGTGTAAGCTTCCTCTTGCAACAATGTTTAAACCTCAGACTCCTTATGAATGCACTCTAAGGGAGCAGTGTAAAGACTTTCCAGTTTCGGCTCTAAGCTTAATTGAGACTTTACTTTCCGTTGACCCTCTCAGGCGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCCAGCCGTATGCTTGTGATCCATCAATTCTGCCAAAGTATCCACCTCACAAAGAAATGGATATCAGGAATTGGGAAGAAGCACATAGGAAAAAAGCTGGAGGTAAAGTGCAGGATGCTGCGAAATCAAGAAAACAAAAGCGAGTCCATAAAATTTTGCAAGAACCAACCCGTGTCAATAACTCAGCTCCAAGAAAAGAGGAAATGCAGCACATCTCTCCAAACGCTCGTAAAGACGATGGAAAAACGCATATTCCTAAGGAAAAAGGAGGAGCTATGCATAGGGGGGCGTCGAAGCCATCATCAAATGCCACGTCAGGGACTACCCGCGTAATGGATGTATCTCATGGCTTTAGTGTACCAGTGCCAGTCTCAGGATCCAATGGCTTTGCATGGGCCAAAAACAGAAAAGTAGATGCTACGTCTACTTTATCAGACGGCTCAAAAAGCAAAATAAGTGCACTCGATCCATCCTTTGCAAAAGGCACCTATGATTTAACCAAACGAGGGACAGATGTATCAGAAAGAAGAAATATTGGCAATGCAAGCCATCATGACAAGACTTCCAACCATCGACAACAAAATCATAAGGTTCCACATGGCACACCAGACTCTCTTAGTGAAGCTGATGAATACAATTATATAGACATTGATCCGTCAGAACAAAAAGATTTTGTGATAAATACTCAGAGCCACAGAAAGCAAGTTGATCTCCCTGAATTATCGGGACCCCAAATATCTCGGCCAAATAGAATCATTGAGTCGTTACAGAGGAATGAAAATGGTATTTATCGATCAACTCGCAAATCAAGACTAGGAAGAGGTATAGAATCTGTGAGTTCTATGTGTGCTATTGTTGGGTAG 2052 0.443 MGCINSKKAIAGASPEYVRSVSVTTDKRSSVAEPPSRVRSGALNFGTKAEQPSEDRIQDGKRFKRNSSQGTGSLRISHRFVEAEQNAAGWPPWLTSVAGEAIQGWVPLKADSFEKLDKIGQGTYSSVFRAREVETGRMVALKKVHIENFHPESIRFMAREIAILRKLDHPNVMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDVKFSETQVKCYMRQLLSGLEHCHIHGVMHRDIKTSNILVNNEGVLKIGDFGLANTLNNKHPLTSCVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEYWKKCKLPLATMFKPQTPYECTLREQCKDFPVSALSLIETLLSVDPLRRGTASSALMSEYFSTQPYACDPSILPKYPPHKEMDIRNWEEAHRKKAGGKVQDAAKSRKQKRVHKILQEPTRVNNSAPRKEEMQHISPNARKDDGKTHIPKEKGGAMHRGASKPSSNATSGTTRVMDVSHGFSVPVPVSGSNGFAWAKNRKVDATSTLSDGSKSKISALDPSFAKGTYDLTKRGTDVSERRNIGNASHHDKTSNHRQQNHKVPHGTPDSLSEADEYNYIDIDPSEQKDFVINTQSHRKQVDLPELSGPQISRPNRIIESLQRNENGIYRSTRKSRLGRGIESVSSMCAIVG 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2190g00011 683 SMART serkin_6 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2190g00011 683 FunFam probable serine/threonine-protein kinase At1g54610 196 434 - -
Pral2190g00011 683 MobiDBLite consensus disorder prediction 457 490 - -
Pral2190g00011 683 SUPERFAMILY Protein kinase-like (PK-like) 107 402 IPR011009 -
Pral2190g00011 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Pral2190g00011 683 ProSitePatterns Protein kinases ATP-binding region signature. 119 142 IPR017441 GO:0005524
Pral2190g00011 683 FunFam probable serine/threonine-protein kinase At1g54610 100 195 - -
Pral2190g00011 683 MobiDBLite consensus disorder prediction 429 505 - -
Pral2190g00011 683 MobiDBLite consensus disorder prediction 564 589 - -
Pral2190g00011 683 CDD STKc_CDK9_like 113 395 - -
Pral2190g00011 683 ProSiteProfiles Protein kinase domain profile. 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2190g00011 683 MobiDBLite consensus disorder prediction 20 71 - -
Pral2190g00011 683 Gene3D Phosphorylase Kinase; domain 1 100 195 - -
Pral2190g00011 683 Gene3D Transferase(Phosphotransferase) domain 1 196 435 - -
Pral2190g00011 683 MobiDBLite consensus disorder prediction 558 604 - -
Pral2190g00011 683 PANTHER CELL DIVISION PROTEIN KINASE 111 399 - -
Pral2190g00011 683 Pfam Protein kinase domain 113 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2190g00011 Pral-Chr2190 78193 82547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2190g00011 105 450 Core Cell Cycle Gene Families AT5G10270 45.455 6.60e-106 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pral2190g00011 Pkinase 1.6e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2190g00011 - - lja:Lj1g3v2982400.1 837.41